ID K0BAW0_9ARCH Unreviewed; 584 AA.
AC K0BAW0;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 24-JAN-2024, entry version 48.
DE RecName: Full=DNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00012417};
DE EC=2.7.7.7 {ECO:0000256|ARBA:ARBA00012417};
GN ORFNames=NSED_04090 {ECO:0000313|EMBL:AFS82624.1};
OS Candidatus Nitrosopumilus sediminis.
OC Archaea; Nitrososphaerota; Nitrososphaeria; Nitrosopumilales;
OC Nitrosopumilaceae; Nitrosopumilus.
OX NCBI_TaxID=1229909 {ECO:0000313|EMBL:AFS82624.1, ECO:0000313|Proteomes:UP000006100};
RN [1] {ECO:0000313|EMBL:AFS82624.1, ECO:0000313|Proteomes:UP000006100}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AR2 {ECO:0000313|EMBL:AFS82624.1,
RC ECO:0000313|Proteomes:UP000006100};
RX PubMed=23209211; DOI=10.1128/JB.01869-12;
RA Park S.J., Kim J.G., Jung M.Y., Kim S.J., Cha I.T., Ghai R.,
RA Martin-Cuadrado A.B., Rodriguez-Valera F., Rhee S.K.;
RT "Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, "Candidatus
RT Nitrosopumilus sediminis" AR2, from Svalbard in the Arctic Circle.";
RL J. Bacteriol. 194:6948-6949(2012).
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DR EMBL; CP003843; AFS82624.1; -; Genomic_DNA.
DR AlphaFoldDB; K0BAW0; -.
DR STRING; 1229909.NSED_04090; -.
DR KEGG; nir:NSED_04090; -.
DR PATRIC; fig|1229909.8.peg.884; -.
DR eggNOG; arCOG15271; Archaea.
DR HOGENOM; CLU_459023_0_0_2; -.
DR Proteomes; UP000006100; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR Gene3D; 3.90.1600.10; Palm domain of DNA polymerase; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR004868; DNA-dir_DNA_pol_B_mt/vir.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR023211; DNA_pol_palm_dom_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR Pfam; PF03175; DNA_pol_B_2; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
PE 4: Predicted;
FT DOMAIN 110..404
FT /note="DNA-directed DNA polymerase family B
FT mitochondria/virus"
FT /evidence="ECO:0000259|Pfam:PF03175"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 584 AA; 68850 MW; 627A48B04C270925 CRC64;
MNLKRVFTKK PQNRDPAKSH KRPVYTIDTE TYNGNIFLIA DSDGRYLDEI TPESCLEWLF
CRKYEGSWCF CYNLGYDAEV ILKLLGSELF KYRDTGKLKF SFKKFKIEYH PNKCLKISKG
HHSVIFYDIA QFYHASLTDA YQNNIKKLPK KYLEIKSKRS QFSITYYKRN TKQVRDYCIQ
DCKLTKELTI HWIKLFYKAF GFYPARWVSS GYLAEKVLIN NGINFPKFDD TPYEVQEMAW
KTYYGGRFEI TKRGYIGTAY KYDINSAYPY SMTKIPDLTK GKWIKRKSIH KNALLGFFRI
ITDIPDCKYI PPFPFRTNGL IIFPSGKFET FVTLDELKAT DTKYYKIIDS FQFVPNDKVI
YPFKEFVESM YEKRMKLKNE GNPLQLPIKI ILNSIYGKTG QKVNRIMGNM FNPVIFASIT
GYTRACMYRF VMENGIEDKV VFFATDSVCT TKELDIDSEK LGEFSLEESA DDVFVLQNGF
YRFNKKWKQR GIGKLGSKEI EHLETFEKNG KLYYKFKVLR NSRLRSSILQ DCISNIGKIR
EYVREVNLNA DRKRMWLEII SSINEKKMCK SISISLNYLQ TEQI
//
