ID K0BDF8_9ARCH Unreviewed; 426 AA.
AC K0BDF8;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE SubName: Full=Blue (Type1) copper domain-containing protein {ECO:0000313|EMBL:AFS83080.1};
GN ORFNames=NSED_06400 {ECO:0000313|EMBL:AFS83080.1};
OS Candidatus Nitrosopumilus sediminis.
OC Archaea; Nitrososphaerota; Nitrososphaeria; Nitrosopumilales;
OC Nitrosopumilaceae; Nitrosopumilus.
OX NCBI_TaxID=1229909 {ECO:0000313|EMBL:AFS83080.1, ECO:0000313|Proteomes:UP000006100};
RN [1] {ECO:0000313|EMBL:AFS83080.1, ECO:0000313|Proteomes:UP000006100}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AR2 {ECO:0000313|EMBL:AFS83080.1,
RC ECO:0000313|Proteomes:UP000006100};
RX PubMed=23209211; DOI=10.1128/JB.01869-12;
RA Park S.J., Kim J.G., Jung M.Y., Kim S.J., Cha I.T., Ghai R.,
RA Martin-Cuadrado A.B., Rodriguez-Valera F., Rhee S.K.;
RT "Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, "Candidatus
RT Nitrosopumilus sediminis" AR2, from Svalbard in the Arctic Circle.";
RL J. Bacteriol. 194:6948-6949(2012).
CC -!- COFACTOR:
CC Name=Cu cation; Xref=ChEBI:CHEBI:23378;
CC Evidence={ECO:0000256|PIRSR:PIRSR602386-1};
CC Note=Binds 1 copper ion per subunit. {ECO:0000256|PIRSR:PIRSR602386-1};
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DR EMBL; CP003843; AFS83080.1; -; Genomic_DNA.
DR RefSeq; WP_014965450.1; NC_018656.1.
DR AlphaFoldDB; K0BDF8; -.
DR STRING; 1229909.NSED_06400; -.
DR GeneID; 13697073; -.
DR KEGG; nir:NSED_06400; -.
DR PATRIC; fig|1229909.8.peg.1408; -.
DR eggNOG; arCOG02926; Archaea.
DR eggNOG; arCOG08764; Archaea.
DR HOGENOM; CLU_052934_0_0_2; -.
DR OrthoDB; 11836at2157; -.
DR Proteomes; UP000006100; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005507; F:copper ion binding; IEA:InterPro.
DR GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
DR Gene3D; 2.60.40.420; Cupredoxins - blue copper proteins; 1.
DR InterPro; IPR002386; Amicyanin/Pseudoazurin.
DR InterPro; IPR000923; BlueCu_1.
DR InterPro; IPR008972; Cupredoxin.
DR PANTHER; PTHR36507; BLL1555 PROTEIN; 1.
DR PANTHER; PTHR36507:SF1; CELL SURFACE LIPOPROTEIN; 1.
DR Pfam; PF00127; Copper-bind; 1.
DR PRINTS; PR00155; AMICYANIN.
DR SUPFAM; SSF49503; Cupredoxins; 1.
PE 4: Predicted;
KW Copper {ECO:0000256|ARBA:ARBA00023008, ECO:0000256|PIRSR:PIRSR602386-1};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|PIRSR:PIRSR602386-1}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 7..26
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 348..426
FT /note="Blue (type 1) copper"
FT /evidence="ECO:0000259|Pfam:PF00127"
FT BINDING 373
FT /ligand="Cu cation"
FT /ligand_id="ChEBI:CHEBI:23378"
FT /evidence="ECO:0000256|PIRSR:PIRSR602386-1"
FT BINDING 413
FT /ligand="Cu cation"
FT /ligand_id="ChEBI:CHEBI:23378"
FT /evidence="ECO:0000256|PIRSR:PIRSR602386-1"
FT BINDING 416
FT /ligand="Cu cation"
FT /ligand_id="ChEBI:CHEBI:23378"
FT /evidence="ECO:0000256|PIRSR:PIRSR602386-1"
FT BINDING 419
FT /ligand="Cu cation"
FT /ligand_id="ChEBI:CHEBI:23378"
FT /evidence="ECO:0000256|PIRSR:PIRSR602386-1"
SQ SEQUENCE 426 AA; 45271 MW; 8F8C5FA9DE92AB42 CRC64;
MAGIDRAAIA FSIAIVVIGV GFAFYMDGVQ NAGPVISAPV ASKTVEEKTQ TDPFADIANK
VKQEAPAKPM KSGWDRLTSE TDPGVGHETH QLAIILAPSD KVYSGTLKYD ASEPIQLVTL
HGPLAAGEDK GQAIWTPDGE TKFALTFVDP KNARGEWEFA GNALAVHTMN TEPFIVDYKV
DYKEKPMSDT VMTGTVQTVQ DPGVGHESHQ LAVLLAPSSD VYSGILSYSA SENIQLVTLR
GPIGADEKPA KTWTPDGETI FELTFVDPKN AMGSWKFSGN ALAVHTMKTN QATISYSVSA
TTTAGKTVQL EEKVAMKETT VDKPTGPTTH TVDIPVGTSV PGCEESNACY LPADITINVG
DTVEWINIDT AAHTVTGGSP ADGPSGVFDS SLVMADASYA FTFNDSGSYD YFCMVHPWMT
GSVTVN
//
