ID K0P2K8_9BACT Unreviewed; 414 AA.
AC K0P2K8;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE SubName: Full=Nitrogen fixation protein vnfA {ECO:0000313|EMBL:CCM10544.1};
GN Name=vnfA {ECO:0000313|EMBL:CCM10544.1};
GN ORFNames=CAHE_0767 {ECO:0000313|EMBL:CCM10544.1};
OS Cardinium endosymbiont cEper1 of Encarsia pergandiella.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Amoebophilaceae;
OC Cardinium.
OX NCBI_TaxID=1231626 {ECO:0000313|EMBL:CCM10544.1, ECO:0000313|Proteomes:UP000003996};
RN [1] {ECO:0000313|EMBL:CCM10544.1, ECO:0000313|Proteomes:UP000003996}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Zchori-Fein et al. 2004 {ECO:0000313|Proteomes:UP000003996};
RX PubMed=23133394; DOI=10.1371/journal.pgen.1003012;
RA Penz T., Schmitz-Esser S., Kelly S.E., Cass B.N., Muller A., Woyke T.,
RA Malfatti S.A., Hunter M.S., Horn M.;
RT "Comparative Genomics Suggests an Independent Origin of Cytoplasmic
RT Incompatibility in Cardinium hertigii.";
RL PLoS Genet. 8:e1003012-e1003012(2012).
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DR EMBL; HE983995; CCM10544.1; -; Genomic_DNA.
DR RefSeq; WP_014934909.1; NC_018605.1.
DR AlphaFoldDB; K0P2K8; -.
DR STRING; 1231626.CAHE_0767; -.
DR KEGG; che:CAHE_0767; -.
DR PATRIC; fig|1231626.3.peg.754; -.
DR eggNOG; COG2204; Bacteria.
DR HOGENOM; CLU_000445_119_0_10; -.
DR OrthoDB; 9782110at2; -.
DR BioCyc; CEND1231626:AL022_RS03535-MONOMER; -.
DR Proteomes; UP000003996; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071:SF120; L-LYSINE AMINOMUTASE REGULATOR; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 14..243
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 414 AA; 47181 MW; D3B1CDCB23C98F26 CRC64;
MKEDLQYIKQ RFNIIGNAPL LNRAVEIAIQ VASTDLSVLI MGESGTGKES FSKIIHGLSP
CRHGKFIAIN CGAIPEGTID AELFGHEKGA FTSALESRKG YFEEANGGTI FLDEIGEMPL
GTQTRLLRIL EYGEYIKVGA SSVQKTKVRV VAATHVDLIH AIQQSKFRED LYYRLNTVPI
NIPPLRERGA DIIQLFHKFS SDFATKYRTK PLEIRTESKD ILCTYPFPGN IRQLKNIVEQ
MALLEEVAIV TPQVLEKYLP KVQNHTLPVL YKKWNNNELL EKEYIYPILF DLKRDIAELK
ALLFNLMESG TINHPIIKED PRRFSTHSDP KNIAQQIHLL ETAQSFKEDQ LNCIGASDKT
ENLSIEAQEQ ALIRRSLQKN HGNRKNAADD LGISERTLYR KIKQYEIEEF DVKR
//
