ID K0QZN9_THAOC Unreviewed; 356 AA.
AC K0QZN9;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=MYND-type domain-containing protein {ECO:0000259|PROSITE:PS50865};
GN ORFNames=THAOC_37737 {ECO:0000313|EMBL:EJK43784.1};
OS Thalassiosira oceanica (Marine diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK43784.1, ECO:0000313|Proteomes:UP000266841};
RN [1] {ECO:0000313|EMBL:EJK43784.1, ECO:0000313|Proteomes:UP000266841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK43784.1,
RC ECO:0000313|Proteomes:UP000266841};
RX PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66;
RA Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A.,
RA Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G.,
RA Rosenstiel P., Hippler M., Laroche J.;
RT "Genome and low-iron response of an oceanic diatom adapted to chronic iron
RT limitation.";
RL Genome Biol. 13:R66-R66(2012).
CC -!- SIMILARITY: Belongs to the sel-1 family.
CC {ECO:0000256|ARBA:ARBA00038101}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK43784.1}.
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DR EMBL; AGNL01050638; EJK43784.1; -; Genomic_DNA.
DR AlphaFoldDB; K0QZN9; -.
DR EnsemblProtists; EJK43784; EJK43784; THAOC_37737.
DR eggNOG; ENOG502RZ2E; Eukaryota.
DR Proteomes; UP000266841; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 6.10.140.2220; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR006597; Sel1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR002893; Znf_MYND.
DR PANTHER; PTHR11102; SEL-1-LIKE PROTEIN; 1.
DR PANTHER; PTHR11102:SF163; SEL1 DOMAIN PROTEIN REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF08238; Sel1; 2.
DR Pfam; PF01753; zf-MYND; 1.
DR SMART; SM00671; SEL1; 2.
DR SUPFAM; SSF81901; HCP-like; 1.
DR SUPFAM; SSF144232; HIT/MYND zinc finger-like; 1.
DR PROSITE; PS01360; ZF_MYND_1; 1.
DR PROSITE; PS50865; ZF_MYND_2; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000266841};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00134}.
FT TRANSMEM 18..36
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 67..108
FT /note="MYND-type"
FT /evidence="ECO:0000259|PROSITE:PS50865"
SQ SEQUENCE 356 AA; 39067 MW; A54F2D518E28F23D CRC64;
MPVLGDDFQE GGDAPFDVLS VIGTVMALFA IGVIMARGSN AHAGDTVVGG GNSGGLADEL
VKRGEACANC GKQGSDTVRL KYCTACRLVK YCGLDCQRAH RKQHKKACKQ RAAELKDEQL
YSQGHERAEG DFCPICTLPI PLPIGEHCIF KSCCMKRICN GCDLAAEERS MFDCPFCRTP
YPGNEANALA MIQTRVEKKD PTAINYLGKK YFFGDLGLQK DMGKVIELWT EAVELGSIEA
LYNLGIVYDT GNGVKQDKAK AAEFYKKAAM QGHVESRNNL GCSEVEKGNN NRGVRHLLIS
AQMGYKDSVE AIKRMFMDGN ATKAQYAEAL KGYQDAVEEM KSHDRDEAKT LLEWKD
//
