ID K0QZP4_THAOC Unreviewed; 433 AA.
AC K0QZP4;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE RecName: Full=MYND-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=THAOC_37714 {ECO:0000313|EMBL:EJK43804.1};
OS Thalassiosira oceanica (Marine diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK43804.1, ECO:0000313|Proteomes:UP000266841};
RN [1] {ECO:0000313|EMBL:EJK43804.1, ECO:0000313|Proteomes:UP000266841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK43804.1,
RC ECO:0000313|Proteomes:UP000266841};
RX PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66;
RA Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A.,
RA Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G.,
RA Rosenstiel P., Hippler M., Laroche J.;
RT "Genome and low-iron response of an oceanic diatom adapted to chronic iron
RT limitation.";
RL Genome Biol. 13:R66-R66(2012).
CC -!- SIMILARITY: Belongs to the sel-1 family.
CC {ECO:0000256|ARBA:ARBA00038101}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK43804.1}.
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DR EMBL; AGNL01050606; EJK43804.1; -; Genomic_DNA.
DR AlphaFoldDB; K0QZP4; -.
DR EnsemblProtists; EJK43804; EJK43804; THAOC_37714.
DR eggNOG; ENOG502QR5D; Eukaryota.
DR Proteomes; UP000266841; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 6.10.140.2220; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR006597; Sel1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR002893; Znf_MYND.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR11102; SEL-1-LIKE PROTEIN; 1.
DR PANTHER; PTHR11102:SF163; SEL1 DOMAIN PROTEIN REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF08238; Sel1; 4.
DR Pfam; PF01753; zf-MYND; 1.
DR SMART; SM00671; SEL1; 4.
DR SUPFAM; SSF81901; HCP-like; 1.
DR SUPFAM; SSF144232; HIT/MYND zinc finger-like; 1.
DR PROSITE; PS01360; ZF_MYND_1; 1.
DR PROSITE; PS50865; ZF_MYND_2; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000266841};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00134}.
FT DOMAIN 94..138
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 376..418
FT /note="MYND-type"
FT /evidence="ECO:0000259|PROSITE:PS50865"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 433 AA; 48433 MW; 9ECEAABDED8ABBC7 CRC64;
MSDEPLTAST GPMVGDDEER QKTDEERLLD EIAEQKDLID ALTGDTCEEI AHRAPQKKLG
QLEFKYQLLV EEKRLARVLL KFQELYGDLY TEPCLICLDD IHVHAATDMT EIFYCCGGFV
CKSCAGDIKG LDKCPLCRES FAVNSAALYK WQVMTLAKRG VSWAQREAGI LMIDGMEGLQ
KQEKAGLEWL NKAAAQNDPS ALHELSSLYR EGMASELGKS QEKANELLLK AANLGFANAN
SELGDCYYRG VNGFEEDDDE AYFRASVAFA LDGTDEEAAE ILGYFHFDAE SIPEPSLYLA
CHYLNIAASE DSSGDESFNY SIALHKLNQH LHDGYKANGS DATPALLFWL RKSRDLGHEN
GTRLLKKLES NGQSRCANCS KKVKADEKLK QCSKCRAKWY CSKECQVEAW RAGHKKDCKR
AAILKFEDYL NAE
//
