ID K0RLB4_THAOC Unreviewed; 1263 AA.
AC K0RLB4;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
DE Flags: Fragment;
GN ORFNames=THAOC_31449 {ECO:0000313|EMBL:EJK49651.1};
OS Thalassiosira oceanica (Marine diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK49651.1, ECO:0000313|Proteomes:UP000266841};
RN [1] {ECO:0000313|EMBL:EJK49651.1, ECO:0000313|Proteomes:UP000266841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK49651.1,
RC ECO:0000313|Proteomes:UP000266841};
RX PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66;
RA Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A.,
RA Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G.,
RA Rosenstiel P., Hippler M., Laroche J.;
RT "Genome and low-iron response of an oceanic diatom adapted to chronic iron
RT limitation.";
RL Genome Biol. 13:R66-R66(2012).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC Evidence={ECO:0000256|ARBA:ARBA00001556};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK49651.1}.
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DR EMBL; AGNL01044556; EJK49651.1; -; Genomic_DNA.
DR AlphaFoldDB; K0RLB4; -.
DR EnsemblProtists; EJK49651; EJK49651; THAOC_31449.
DR eggNOG; KOG0920; Eukaryota.
DR Proteomes; UP000266841; Unassembled WGS sequence.
DR GO; GO:0004386; F:helicase activity; IEA:InterPro.
DR Gene3D; 1.20.120.1080; -; 1.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR PANTHER; PTHR18934:SF237; ATP-DEPENDENT DNA/RNA HELICASE DHX36; 1.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR Pfam; PF04408; HA2_N; 1.
DR SMART; SM00847; HA2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000266841}.
FT DOMAIN 742..845
FT /note="Helicase-associated"
FT /evidence="ECO:0000259|SMART:SM00847"
FT REGION 1..132
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 267..358
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 455..493
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 512..673
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1164..1263
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 57..111
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 290..304
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 330..350
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 456..475
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 516..538
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 539..569
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 573..589
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 625..645
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 653..673
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1180..1232
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EJK49651.1"
SQ SEQUENCE 1263 AA; 137410 MW; 7088121DDF17020C CRC64;
AEETPGRPPA GTAAEDGGTG DGAPPPGPAL ARHVRVGQRR LRRGVDDTDG EDEGDEDGGA
RAGPRDGKTD AEDAAAPRDA DALDDDAREA EEILRLAALR EAERRNQDDE AEDDGGDGGD
GGGLTLDTTD PSFDGRRSWI KVRDLLQDIK RSSSAPSLAD KTTWTSDGSL WESCCALGIN
NCSERKIEPH AEAFGRFFEL QGTGPQQKLR GRKLRIEVDG ETEARILGGE SAAVVEYAKP
VLYGDADRLA ELVRLVDVAN SLLGRHRTEG RGGEEADAPV PPPRLLVRGR LRPPRVRQRR
RGPLRGHRLG EDHAAPPDTH GGRVVPPLGR RGRRGRDGTD VRHGTDRVHP APPHICHVGG
RAGRVRAERG GGGEGGVPDT LRAPRVRHDG AAVLHHGDTP AVPGGQSEAR GGGLCHHRRA
YRRAPQARTH VRDDRRVELH LVLRLELLGV VPADPRQDEL PHRGALPRGH MRDRPVRAGQ
GSPADEQEQG TVEGAEERLG LLGRGGQGEV LRAGLPVREA EPRLRPDRER APAAAHARRR
PDMRRRRAHR VVRASHLGRR RRGRLPRLGP HLRPRLAGDH RRHEGTRTEA EGLPTTVRLG
ARSGLDRPPP PQPGPPVGSD EDIRQAPSGT EEDHRFDQPG RDEHHRRGRG LRRRPGTLEG
EDLLGSHEHR ESRDLLGLKV ERAAEAGEVR TVQAGKVLQA VHGRTPVEEL CLMVKTLDLG
GLSIREILSL AINPPEPKAV ENGIQLLTDL GALKPVAGGA AEELTPLGER LAQIPVHPAI
GKCLLMGSLF SAYGDGSCGL RPLIAACATL SYKSPFVLPF GKEKEADRAR KRYGHGLLSD
HRLFAKVSRD YGRWRNSSRG EFARWADDNF LSPKTLKMTE QIEYDLCRHV EDLSRDGPGE
IRGGGDRRAA LTSGDMSPSL LMAILGASLS ISFTAPGTKK LSSLGGGVPC SVHPSSLCVA
VEDAGNERML WKKYRHLLRE QQDNRVVEEF VVDEPEKLFI VGWFERLKTS DVYLRDVSLI
RDPLPLLLLL PGVERRGGGS AADDGGSLIF EVVGGKSSQG GESGADQSQG KRLLLKAKDR
RTADLLLALR QRLFAFLDMV LSQTQGGRSI SPQLENALER VISELQALFE ISHAMYDRNR
SFNRDPEVVE LSGLHDAAHC VAMRSGNDDD GASDSGDELM SGMQRGSSSR YGDNNQYGGR
GRGNEPSQNY GNQYSGRGRG NEPSQYYRNQ NGGRGRGNRR RNDGWGRGGN AKRGRGGGGR
GPW
//