GenomeNet

Database: UniProt
Entry: K0RLB4_THAOC
LinkDB: K0RLB4_THAOC
Original site: K0RLB4_THAOC 
ID   K0RLB4_THAOC            Unreviewed;      1263 AA.
AC   K0RLB4;
DT   28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT   28-NOV-2012, sequence version 1.
DT   24-JAN-2024, entry version 24.
DE   RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE            EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
DE   Flags: Fragment;
GN   ORFNames=THAOC_31449 {ECO:0000313|EMBL:EJK49651.1};
OS   Thalassiosira oceanica (Marine diatom).
OC   Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC   Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC   Thalassiosiraceae; Thalassiosira.
OX   NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK49651.1, ECO:0000313|Proteomes:UP000266841};
RN   [1] {ECO:0000313|EMBL:EJK49651.1, ECO:0000313|Proteomes:UP000266841}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK49651.1,
RC   ECO:0000313|Proteomes:UP000266841};
RX   PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66;
RA   Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A.,
RA   Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G.,
RA   Rosenstiel P., Hippler M., Laroche J.;
RT   "Genome and low-iron response of an oceanic diatom adapted to chronic iron
RT   limitation.";
RL   Genome Biol. 13:R66-R66(2012).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC         Evidence={ECO:0000256|ARBA:ARBA00001556};
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EJK49651.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AGNL01044556; EJK49651.1; -; Genomic_DNA.
DR   AlphaFoldDB; K0RLB4; -.
DR   EnsemblProtists; EJK49651; EJK49651; THAOC_31449.
DR   eggNOG; KOG0920; Eukaryota.
DR   Proteomes; UP000266841; Unassembled WGS sequence.
DR   GO; GO:0004386; F:helicase activity; IEA:InterPro.
DR   Gene3D; 1.20.120.1080; -; 1.
DR   InterPro; IPR048333; HA2_WH.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   PANTHER; PTHR18934:SF237; ATP-DEPENDENT DNA/RNA HELICASE DHX36; 1.
DR   PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR   Pfam; PF04408; HA2_N; 1.
DR   SMART; SM00847; HA2; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000266841}.
FT   DOMAIN          742..845
FT                   /note="Helicase-associated"
FT                   /evidence="ECO:0000259|SMART:SM00847"
FT   REGION          1..132
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          267..358
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          455..493
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          512..673
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1164..1263
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        57..111
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        290..304
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        330..350
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        456..475
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        516..538
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        539..569
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        573..589
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        625..645
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        653..673
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1180..1232
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:EJK49651.1"
SQ   SEQUENCE   1263 AA;  137410 MW;  7088121DDF17020C CRC64;
     AEETPGRPPA GTAAEDGGTG DGAPPPGPAL ARHVRVGQRR LRRGVDDTDG EDEGDEDGGA
     RAGPRDGKTD AEDAAAPRDA DALDDDAREA EEILRLAALR EAERRNQDDE AEDDGGDGGD
     GGGLTLDTTD PSFDGRRSWI KVRDLLQDIK RSSSAPSLAD KTTWTSDGSL WESCCALGIN
     NCSERKIEPH AEAFGRFFEL QGTGPQQKLR GRKLRIEVDG ETEARILGGE SAAVVEYAKP
     VLYGDADRLA ELVRLVDVAN SLLGRHRTEG RGGEEADAPV PPPRLLVRGR LRPPRVRQRR
     RGPLRGHRLG EDHAAPPDTH GGRVVPPLGR RGRRGRDGTD VRHGTDRVHP APPHICHVGG
     RAGRVRAERG GGGEGGVPDT LRAPRVRHDG AAVLHHGDTP AVPGGQSEAR GGGLCHHRRA
     YRRAPQARTH VRDDRRVELH LVLRLELLGV VPADPRQDEL PHRGALPRGH MRDRPVRAGQ
     GSPADEQEQG TVEGAEERLG LLGRGGQGEV LRAGLPVREA EPRLRPDRER APAAAHARRR
     PDMRRRRAHR VVRASHLGRR RRGRLPRLGP HLRPRLAGDH RRHEGTRTEA EGLPTTVRLG
     ARSGLDRPPP PQPGPPVGSD EDIRQAPSGT EEDHRFDQPG RDEHHRRGRG LRRRPGTLEG
     EDLLGSHEHR ESRDLLGLKV ERAAEAGEVR TVQAGKVLQA VHGRTPVEEL CLMVKTLDLG
     GLSIREILSL AINPPEPKAV ENGIQLLTDL GALKPVAGGA AEELTPLGER LAQIPVHPAI
     GKCLLMGSLF SAYGDGSCGL RPLIAACATL SYKSPFVLPF GKEKEADRAR KRYGHGLLSD
     HRLFAKVSRD YGRWRNSSRG EFARWADDNF LSPKTLKMTE QIEYDLCRHV EDLSRDGPGE
     IRGGGDRRAA LTSGDMSPSL LMAILGASLS ISFTAPGTKK LSSLGGGVPC SVHPSSLCVA
     VEDAGNERML WKKYRHLLRE QQDNRVVEEF VVDEPEKLFI VGWFERLKTS DVYLRDVSLI
     RDPLPLLLLL PGVERRGGGS AADDGGSLIF EVVGGKSSQG GESGADQSQG KRLLLKAKDR
     RTADLLLALR QRLFAFLDMV LSQTQGGRSI SPQLENALER VISELQALFE ISHAMYDRNR
     SFNRDPEVVE LSGLHDAAHC VAMRSGNDDD GASDSGDELM SGMQRGSSSR YGDNNQYGGR
     GRGNEPSQNY GNQYSGRGRG NEPSQYYRNQ NGGRGRGNRR RNDGWGRGGN AKRGRGGGGR
     GPW
//
DBGET integrated database retrieval system