ID K0RNH3_THAOC Unreviewed; 945 AA.
AC K0RNH3;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=TRAF-type domain-containing protein {ECO:0000259|PROSITE:PS50145};
DE Flags: Fragment;
GN ORFNames=THAOC_26696 {ECO:0000313|EMBL:EJK53794.1};
OS Thalassiosira oceanica (Marine diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK53794.1, ECO:0000313|Proteomes:UP000266841};
RN [1] {ECO:0000313|EMBL:EJK53794.1, ECO:0000313|Proteomes:UP000266841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK53794.1,
RC ECO:0000313|Proteomes:UP000266841};
RX PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66;
RA Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A.,
RA Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G.,
RA Rosenstiel P., Hippler M., Laroche J.;
RT "Genome and low-iron response of an oceanic diatom adapted to chronic iron
RT limitation.";
RL Genome Biol. 13:R66-R66(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK53794.1}.
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DR EMBL; AGNL01036995; EJK53794.1; -; Genomic_DNA.
DR AlphaFoldDB; K0RNH3; -.
DR EnsemblProtists; EJK53794; EJK53794; THAOC_26696.
DR eggNOG; ENOG502QSC3; Eukaryota.
DR Proteomes; UP000266841; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 6.10.140.530; -; 3.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR005114; Helicase_assoc.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR001293; Znf_TRAF.
DR PANTHER; PTHR33418:SF1; HA DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR33418; HELICASE-ASSOCIATED; 1.
DR Pfam; PF03457; HA; 3.
DR Pfam; PF02176; zf-TRAF; 1.
DR SUPFAM; SSF49599; TRAF domain-like; 1.
DR PROSITE; PS50145; ZF_TRAF; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00207}; Reference proteome {ECO:0000313|Proteomes:UP000266841};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00207};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00207}.
FT DOMAIN 387..434
FT /note="TRAF-type"
FT /evidence="ECO:0000259|PROSITE:PS50145"
FT ZN_FING 387..434
FT /note="TRAF-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00207"
FT REGION 236..328
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 607..681
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 880..945
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 461..495
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 247..267
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 622..643
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 945
FT /evidence="ECO:0000313|EMBL:EJK53794.1"
SQ SEQUENCE 945 AA; 105762 MW; 495E8AB0FA1E7EE5 CRC64;
MMDPDAHTIC RLLERPVDIY ENQRFWVGRG FSRKGLLPTE RKPYSTADGS LSFRTVREAA
LSLLRYDVVA NSGSKRRQGR RGWSYHEYDG RQQPHAQAVQ ETASALVAHD EDSDYECSVE
DGADGGRLSL DERCGFEVYI DENATCDHEG WSYFPDFNNN SMLSPNNHSR GILDFVRRRK
LRRVAIFRPD FFLPKDVFQP CDFCDSKVVD DLSVSSFERK LPSSWVHRKT GASHSEPACR
LPGTFNKQKE CHPRRALPGD AVRVEDEPYG RAGPAAQGCA HRHARHRHES AGRGQGARVE
PKHQQGQDPT DGVPGGERWE AAAGPAGPAR ERTVLARLVI KDVDRYRFQM HCDSCSCREG
DRCEYTLMTC PNDNCTAIYS RKYRDEHDEV CGYRRVPCPS GCGAAVARMD LHKHVRDECP
MREAACPLSV VGCTACVRAG DISRHLSEGA DAHFVLVANR MMEYQQLFRR MDGRIKELEE
RNAMLENVLR ETAAKLQSKD DAKSAAGDVK KLDKRIGALE TKCKTEFRKI ENERRKLCAK
PAYVPYPFPF QRQIQSQPCS SPPLATTLWT DPSPLPPPVP TALGGPALGW LPHKTCPIFV
KIKSWSPETD PVQPRTESSQ RSKLKAGVDV DREGEDLSTR SRQKSAGKGK ICQSVHGQGK
PMDEPESPRT DPSEPNGKAP LVHRQEQWNA RFRELENYKA EHGNCSVPQK LGTLGGWVNS
QRTARNSGTL PEERVRKLDE IGFNWGTARG RRGTPQSWDE RLGELMEYKA EHGNCNIPQS
QGSLGKWVDN QRHQKRKGKL SEERVRKLVA LGFEFCPHKT LPTWDERLVE LVQYKADHGH
CSVSKRRLKP LATWVESQRS KRKKGKLSED RIKKLDVLGF EWSPGARGPN PHGGGPSSSE
RPPTTGGDRS RSDAVARAGT CGPGRPSSSA GAARPSEGGT SSSER
//
