ID K0RUN1_THAOC Unreviewed; 544 AA.
AC K0RUN1;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=MYND-type domain-containing protein {ECO:0000259|PROSITE:PS50865};
GN ORFNames=THAOC_22386 {ECO:0000313|EMBL:EJK57558.1};
OS Thalassiosira oceanica (Marine diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK57558.1, ECO:0000313|Proteomes:UP000266841};
RN [1] {ECO:0000313|EMBL:EJK57558.1, ECO:0000313|Proteomes:UP000266841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK57558.1,
RC ECO:0000313|Proteomes:UP000266841};
RX PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66;
RA Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A.,
RA Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G.,
RA Rosenstiel P., Hippler M., Laroche J.;
RT "Genome and low-iron response of an oceanic diatom adapted to chronic iron
RT limitation.";
RL Genome Biol. 13:R66-R66(2012).
CC -!- SIMILARITY: Belongs to the sel-1 family.
CC {ECO:0000256|ARBA:ARBA00038101}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK57558.1}.
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DR EMBL; AGNL01027877; EJK57558.1; -; Genomic_DNA.
DR AlphaFoldDB; K0RUN1; -.
DR EnsemblProtists; EJK57558; EJK57558; THAOC_22386.
DR eggNOG; ENOG502T2Q7; Eukaryota.
DR Proteomes; UP000266841; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 6.10.140.2220; -; 2.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR006597; Sel1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR002893; Znf_MYND.
DR PANTHER; PTHR11102:SF147; FIBRONECTIN TYPE-II DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11102; SEL-1-LIKE PROTEIN; 1.
DR Pfam; PF08238; Sel1; 3.
DR Pfam; PF01753; zf-MYND; 2.
DR SMART; SM00671; SEL1; 3.
DR SUPFAM; SSF81901; HCP-like; 2.
DR SUPFAM; SSF144232; HIT/MYND zinc finger-like; 2.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS01360; ZF_MYND_1; 1.
DR PROSITE; PS50865; ZF_MYND_2; 2.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000266841};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00134}.
FT DOMAIN 11..52
FT /note="MYND-type"
FT /evidence="ECO:0000259|PROSITE:PS50865"
FT DOMAIN 305..346
FT /note="MYND-type"
FT /evidence="ECO:0000259|PROSITE:PS50865"
FT REGION 510..544
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 515..535
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 544 AA; 60857 MW; A4CD79B8ABA3F51D CRC64;
MNCGGDVVCA CANCGKLGSN TVRLKYCTAC RLVKYCCVEC QKAHRKQLKK ACKQRAAELK
DEELYGQGHE RPEGDFCPIC TRQYSSQLGR IRSNRVHELT MVRARVAKKD PAAIYHLGYQ
YYYGKCGLQR DMRKSVDLWT EAAELGSIEA HQFVLLRHIM ISAKMGYTEA IESIKIMFLK
GNATKEQYAE ALNGYHQVVA EEMKSHDRDE ETWIYKLKRA LYPPGQLLIP PHLITFLDWP
ETTAGDARRR RAARIGEKKE LYSSEISWQA GGAVENVRFG LIGQDNWRHT AMNCVPVADG
GDESCANCGK TGSGTVKLKD CAACRLVKYC GVDCQKVHRK QHKNLCKQRV AELEDELLYS
QGHERPEGDF CPICTLPIPL PMNEHSFFKV CCSKRICSGC TFAAKKRGMS GCPFCRTSLP
DSDADVLASI QKRVLKKDPA AIDFLGRSYA NGNLGLQRDM QKSVNLWTEA AELGSIEALC
NLGLAHVTEF NDVATAVKFW TKAAMQGHVE SRHNLGSNRS SKREPRPRCK TPNDRSENGG
EGFS
//
