ID K0RV88_THAOC Unreviewed; 568 AA.
AC K0RV88;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=UPF0020 domain-containing protein {ECO:0000259|Pfam:PF01170};
GN ORFNames=THAOC_27982 {ECO:0000313|EMBL:EJK52716.1};
OS Thalassiosira oceanica (Marine diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK52716.1, ECO:0000313|Proteomes:UP000266841};
RN [1] {ECO:0000313|EMBL:EJK52716.1, ECO:0000313|Proteomes:UP000266841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK52716.1,
RC ECO:0000313|Proteomes:UP000266841};
RX PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66;
RA Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A.,
RA Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G.,
RA Rosenstiel P., Hippler M., Laroche J.;
RT "Genome and low-iron response of an oceanic diatom adapted to chronic iron
RT limitation.";
RL Genome Biol. 13:R66-R66(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK52716.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AGNL01039347; EJK52716.1; -; Genomic_DNA.
DR AlphaFoldDB; K0RV88; -.
DR EnsemblProtists; EJK52716; EJK52716; THAOC_27982.
DR eggNOG; ENOG502QTIB; Eukaryota.
DR OMA; YFATCIP; -.
DR Proteomes; UP000266841; Unassembled WGS sequence.
DR GO; GO:0008168; F:methyltransferase activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0032259; P:methylation; IEA:InterPro.
DR GO; GO:0034470; P:ncRNA processing; IEA:UniProt.
DR GO; GO:0009451; P:RNA modification; IEA:UniProt.
DR CDD; cd11715; THUMP_AdoMetMT; 1.
DR Gene3D; 3.30.2130.30; -; 1.
DR Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR InterPro; IPR002052; DNA_methylase_N6_adenine_CS.
DR InterPro; IPR000241; RlmKL-like_Mtase.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR PANTHER; PTHR47313; RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE K/L; 1.
DR PANTHER; PTHR47313:SF1; RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE K_L; 1.
DR Pfam; PF01170; UPF0020; 1.
DR SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
DR PROSITE; PS00092; N6_MTASE; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000266841};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..26
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 27..568
FT /note="UPF0020 domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003840597"
FT DOMAIN 314..549
FT /note="UPF0020"
FT /evidence="ECO:0000259|Pfam:PF01170"
SQ SEQUENCE 568 AA; 62035 MW; 0BBAC6C7D24FA4B4 CRC64;
MARRSNAPLV WASIAACVAL RRGVSSFETS STIGNAHRAL GKPIRQPSSV VLRSYDDWYI
EDEAIGDGAT LGDSRESADG DEGKDNKDNR VYFATCIPGL EQALAGELVE IGAKRVQAEG
RSGVRFEGSP LVGLKALVYS RTMHKLLELV ASSAVHQPDS GDDYGYQDFS RGIRTSRDLY
DFVQSNVHVP SLLGDGKGGL LTMSVGTIYS GRPPKELSHT HYTALTVKNS IVDLVRDLRD
DGERPDVDIV CPDVPLILFV NARRQFRSRN WETEDSDVDI AADVDLYRCL HSSGSLHKRG
YRADDSGDAT APIHRAAMKE SLAAGLLLEA GWGKLVNDAR GNGRGAVLLD PMTGSATFPV
EAALIAGDVA PALVRIASWR GRGPNPHASP SFLKWKDFTS EETWNELIAR ATQRAKVGLQ
WAQSETVGGC PSVKILCNEQ NPGAADLAAS SIKKAGVSNI ISLHRGDCID WHLEDDEVIE
GRTMVVSNPP WGIRLTEEID TSWVNLREFL RREAGGTEAW ILSGNPALTK ILRMKKSRSV
CIKTGEQDLR FLKYSIFAKK PVDNEVMR
//
