ID K0SEU2_THAOC Unreviewed; 637 AA.
AC K0SEU2;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 24-JAN-2024, entry version 39.
DE RecName: Full=RING-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=THAOC_14618 {ECO:0000313|EMBL:EJK64628.1};
OS Thalassiosira oceanica (Marine diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK64628.1, ECO:0000313|Proteomes:UP000266841};
RN [1] {ECO:0000313|EMBL:EJK64628.1, ECO:0000313|Proteomes:UP000266841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK64628.1,
RC ECO:0000313|Proteomes:UP000266841};
RX PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66;
RA Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A.,
RA Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G.,
RA Rosenstiel P., Hippler M., Laroche J.;
RT "Genome and low-iron response of an oceanic diatom adapted to chronic iron
RT limitation.";
RL Genome Biol. 13:R66-R66(2012).
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK64628.1}.
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DR EMBL; AGNL01017059; EJK64628.1; -; Genomic_DNA.
DR AlphaFoldDB; K0SEU2; -.
DR EnsemblProtists; EJK64628; EJK64628; THAOC_14618.
DR eggNOG; KOG0804; Eukaryota.
DR OMA; TETQHVW; -.
DR Proteomes; UP000266841; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd16457; RING-H2_BRAP2; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR047243; RING-H2_BRAP2.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR024766; Znf_RING_H2.
DR InterPro; IPR001607; Znf_UBP.
DR PANTHER; PTHR24007; BRCA1-ASSOCIATED PROTEIN; 1.
DR PANTHER; PTHR24007:SF7; BRCA1-ASSOCIATED PROTEIN; 1.
DR Pfam; PF12678; zf-rbx1; 1.
DR Pfam; PF02148; zf-UBP; 1.
DR SMART; SM00184; RING; 1.
DR SMART; SM00290; ZnF_UBP; 1.
DR SUPFAM; SSF57850; RING/U-box; 2.
DR PROSITE; PS50089; ZF_RING_2; 1.
DR PROSITE; PS50271; ZF_UBP; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000266841};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00502}.
FT DOMAIN 312..370
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 345..479
FT /note="UBP-type"
FT /evidence="ECO:0000259|PROSITE:PS50271"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 51..96
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 554..588
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 77..96
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 637 AA; 71711 MW; 3DBBFA85BF0535D9 CRC64;
MDYIPLPDIP EDRRVSKRDD QRYRKQFVSF GNPALGTYWG HFVTRHWKRR ASRSGDEMDA
STNAEDGSDT DKSTGSYDDD VSSSSSSSWS QSTIDSFTSC STASGDGVSN IAAMVNVPPH
HVPDGVLNLV RSHRPFIEHI RIVIGQSSSE ESNRERQLQL RKNSGVVRQR SRTWAHENDG
FADKPTSLID QVAGRTLPRD RTDSFDNSGH EARRCVTQKE IEYNFFGDQS LGAEVDYDKR
YHILFVMDSE ESKNTFVSDL HCRPYTSLDE NETCLVYDAV SVEGPVFAPE VTINGDGPIS
TNHGKDEHER QCPVCLEMLM RPSHESMSGS RGSMSTSSIL TTVCNHSFHV DCIRRWQDTQ
LGSASCPVCR YDHAGLNETL STCHVCSTTN RNYVCLICGV VSCANGPLST AVATVDEIVD
QTLREPTQLG HARRHYEETL HAYALDTETK HVWDFCGGGY VHRLMQNYDG KLVEGADPQN
FAEENSAISF EALERSSVPS YSTSEDEATH RKLEAFAGQY STLLKSQLEQ QRCFYEGRLE
ALRREHGCGR NDDYRSTADL ISALKQERNQ LEQRCVTLRR KVKKIEDDTA FLVDMNESLE
ADKCDFRGQI TEAQNSLAEA KKVTQQILAP WRIRSLI
//
