ID K0SV66_THAOC Unreviewed; 872 AA.
AC K0SV66;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=MYND-type domain-containing protein {ECO:0000259|PROSITE:PS50865};
GN ORFNames=THAOC_09432 {ECO:0000313|EMBL:EJK69320.1};
OS Thalassiosira oceanica (Marine diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK69320.1, ECO:0000313|Proteomes:UP000266841};
RN [1] {ECO:0000313|EMBL:EJK69320.1, ECO:0000313|Proteomes:UP000266841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK69320.1,
RC ECO:0000313|Proteomes:UP000266841};
RX PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66;
RA Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A.,
RA Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G.,
RA Rosenstiel P., Hippler M., Laroche J.;
RT "Genome and low-iron response of an oceanic diatom adapted to chronic iron
RT limitation.";
RL Genome Biol. 13:R66-R66(2012).
CC -!- SIMILARITY: Belongs to the sel-1 family.
CC {ECO:0000256|ARBA:ARBA00038101}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK69320.1}.
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DR EMBL; AGNL01010228; EJK69320.1; -; Genomic_DNA.
DR AlphaFoldDB; K0SV66; -.
DR EnsemblProtists; EJK69320; EJK69320; THAOC_09432.
DR eggNOG; KOG1550; Eukaryota.
DR Proteomes; UP000266841; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 6.10.140.2220; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR049223; DUF6820.
DR InterPro; IPR006597; Sel1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR002893; Znf_MYND.
DR PANTHER; PTHR11102:SF147; FIBRONECTIN TYPE-II DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11102; SEL-1-LIKE PROTEIN; 1.
DR Pfam; PF20699; DUF6820; 2.
DR Pfam; PF08238; Sel1; 2.
DR Pfam; PF01753; zf-MYND; 1.
DR SMART; SM00671; SEL1; 2.
DR SUPFAM; SSF81901; HCP-like; 1.
DR SUPFAM; SSF144232; HIT/MYND zinc finger-like; 1.
DR PROSITE; PS01360; ZF_MYND_1; 1.
DR PROSITE; PS50865; ZF_MYND_2; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000266841};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00134}.
FT DOMAIN 10..52
FT /note="MYND-type"
FT /evidence="ECO:0000259|PROSITE:PS50865"
FT REGION 419..453
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 465..487
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 828..872
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 42..72
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 420..448
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 845..860
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 872 AA; 97753 MW; 9220298A9670792A CRC64;
MSGETPVDAC ANCGKQESSD AVRLKICKAC RSVKYCSVGC QRAHWKQHKA ACKKLAKELE
EERRTCSQRN ERPEGDFCPI CTLPIPLQME DHSIFNVCCM KRVCNGCELA AQKRGMLNCP
FCRSPMHEDD EVELVKVQKR VDANDPVAIE YLARVYFFGG YGVEKDAPRA MKLWTEAAEL
GSIEAHFMIG NRYHYGDVIA QNYTKAIHHW EKAADQGHVM SRHNLGMHDL TKRGMRESAL
RHFMISAKMG FDESLSMIKQ MFDRGHASKV DYAEALKGFQ IAIEEMKSPE RVEVRAYERE
HNFQILYTLV RTPDDAENHS TEKNGDQSGW SDKPLITELQ MFITLAVIDD AEYERDQQQP
NDHALTPNDM IRDVPMIRLA NVRAPMTIVQ GAPRYGPMIT PAPNKRSKMD NCFGKVPCSA
AGSPSSSEPP DGSSGIGVSA TSTLPGVDSP LDPLSWFERE ANRQRCRRGA AEKPNTDIGP
EGGVDGPRWT RGAAGIYDSS IPHLTSVAAA FYRSDVISGS ETSAGRARAM MHNFAVAPAR
LIDNGGRRAI GIALRPQHII GDVLGMNRPT DRSAAEVPQR SPTQISGQKE VNDVINGSRT
SVGRAHLMMS EFVVTPASLI DNVGRRAIGI ALWLQYYGRF IDDATGAWND LDDPEAFDRF
CEDVNDFGIL RWEVEERCNH QIDFLDLTIW INKENRIMTK TFRQYHPHGL SRTQVRAAFD
ETCDNFRGTD AEIDQLTVAF SRPRNIPAID NDQSFCEEQM CLRSFALSRR PQQTAHIVGV
FTTGRELLDG TMDFALLPEY FGGSYDRDYA EKLVVEAFEE EDTGLKVGSG VADNHKKRRT
TTRTRLGNRE RPKPRMIRGS LERPRISQGG EV
//