ID   K1PKC1_CRAGI            Unreviewed;      1877 AA.
AC   K1PKC1;
DT   28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT   28-NOV-2012, sequence version 1.
DT   27-MAR-2024, entry version 41.
DE   SubName: Full=Collagen alpha-6(VI) chain {ECO:0000313|EMBL:EKC24482.1};
GN   ORFNames=CGI_10019585 {ECO:0000313|EMBL:EKC24482.1};
OS   Crassostrea gigas (Pacific oyster) (Crassostrea angulata).
OC   Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
OC   Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Crassostrea.
OX   NCBI_TaxID=29159 {ECO:0000313|EMBL:EKC24482.1};
RN   [1] {ECO:0000313|EMBL:EKC24482.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=05x7-T-G4-1.051#20 {ECO:0000313|EMBL:EKC24482.1};
RX   PubMed=22992520; DOI=10.1038/nature11413;
RA   Zhang G., Fang X., Guo X., Li L., Luo R., Xu F., Yang P., Zhang L.,
RA   Wang X., Qi H., Xiong Z., Que H., Xie Y., Holland P.W., Paps J., Zhu Y.,
RA   Wu F., Chen Y., Wang J., Peng C., Meng J., Yang L., Liu J., Wen B.,
RA   Zhang N., Huang Z., Zhu Q., Feng Y., Mount A., Hedgecock D., Xu Z., Liu Y.,
RA   Domazet-Loso T., Du Y., Sun X., Zhang S., Liu B., Cheng P., Jiang X.,
RA   Li J., Fan D., Wang W., Fu W., Wang T., Wang B., Zhang J., Peng Z., Li Y.,
RA   Li N., Wang J., Chen M., He Y., Tan F., Song X., Zheng Q., Huang R.,
RA   Yang H., Du X., Chen L., Yang M., Gaffney P.M., Wang S., Luo L., She Z.,
RA   Ming Y., Huang W., Zhang S., Huang B., Zhang Y., Qu T., Ni P., Miao G.,
RA   Wang J., Wang Q., Steinberg C.E., Wang H., Li N., Qian L., Zhang G., Li Y.,
RA   Yang H., Liu X., Wang J., Yin Y., Wang J.;
RT   "The oyster genome reveals stress adaptation and complexity of shell
RT   formation.";
RL   Nature 490:49-54(2012).
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DR   EMBL; JH817298; EKC24482.1; -; Genomic_DNA.
DR   HOGENOM; CLU_236296_0_0_1; -.
DR   InParanoid; K1PKC1; -.
DR   GO; GO:0005581; C:collagen trimer; IEA:UniProtKB-KW.
DR   GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR   CDD; cd01472; vWA_collagen; 1.
DR   CDD; cd01450; vWFA_subfamily_ECM; 1.
DR   Gene3D; 3.40.50.10140; Toll/interleukin-1 receptor homology (TIR) domain; 2.
DR   Gene3D; 3.40.50.410; von Willebrand factor, type A domain; 6.
DR   InterPro; IPR000157; TIR_dom.
DR   InterPro; IPR035897; Toll_tir_struct_dom_sf.
DR   InterPro; IPR002035; VWF_A.
DR   InterPro; IPR036465; vWFA_dom_sf.
DR   PANTHER; PTHR24020; COLLAGEN ALPHA; 1.
DR   PANTHER; PTHR24020:SF70; PH DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF13676; TIR_2; 2.
DR   Pfam; PF00092; VWA; 6.
DR   PRINTS; PR00453; VWFADOMAIN.
DR   SMART; SM00255; TIR; 1.
DR   SMART; SM00327; VWA; 6.
DR   SUPFAM; SSF52200; Toll/Interleukin receptor TIR domain; 3.
DR   SUPFAM; SSF53300; vWA-like; 6.
DR   PROSITE; PS50104; TIR; 2.
DR   PROSITE; PS50234; VWFA; 5.
PE   4: Predicted;
KW   Collagen {ECO:0000313|EMBL:EKC24482.1}.
SQ   SEQUENCE   1877 AA;  206161 MW;  AD2C352B077B670C CRC64;
     MRLLILLGAI AAGVWSQVPA GCRSKLDIVF LLDASYSEGS DNFKKQVQFV ENFVNQFNVG
     PDAAQFSVIT FATSVHNEFY LNTYSTVSGV VSGIQKISYR PGATYTDKAL SYAQTVSFQP
     QHGGRPDAEK IVIVLTDGQS SSHANTLTQA QALHASGAEV IAVGIGNSVS NSELEAIASD
     SNHVFQVQDF DLLNTIQNQL TNAACQQAAL HCQSAVADIV FAVDSSSSIT YTDFSKQTLF
     IKNLVRQYNV GSNETQFSVV SFASRVHPEF SLNKYPSKTQ VVGAISSIRH HLGSTHTEDA
     LNYIANNSFS SSNGGRPGVD QWVIVLTDGE STTPTETAAA ADRLHKMGIK VISIGIGKGA
     NQAELEAIAT DPQHVYRVDD YDALHSLMMN IETTTCGYNA CHGNKADIMF LLDSSASEGA
     TNFQHQLEFV QNFTDKFDIG PDAVQIGLAT FSTKPHGYFW LNTYQNKTDL VNATGYVPYL
     PGSTFTDLGL QFALNESFTT AHGARDASVP KILVVLTDGQ STDPPATAVM ADQLHRAGIK
     VITIGIGQNV HKSELTVIAT DRNHVFTATD FKSLSTLQTD LQLETCRKCG DKPADIVFVL
     DASGSEGVEN FKKELNFTAE FIKGFQVGPQ HVQFGLVTFS NYGRSEFYFN TYKDLQSILH
     KLETINYSGG STHTESGLSS AKFHFYSHHG ARPNAQKIAI VLTDGQSYST SRTIQKANDL
     KGMECGSGLS DIVFLLDSSG SETRLNFQKM LTFVQDFTRQ FDIGPKNAQI GVATDKTALL
     AAISGIPYDA GATYTDEGLQ YARTYAFLPS HGGRANASRI VIVMTDGQSM NHANTQREAT
     ALKSQPNMKV IAIGIGSGVN TQELNSIASD PQHVFTVANF DVLNKLNSEL TFTSCQTCGF
     IQTADIIFAV DSSGSEGPVN FQKQLDFVQT FVRDLPVGPN NVQFSVLSFG STVQNNFYLN
     QFSDKRPILD AIQQTDNVGG STQTGEALQY IREHNILSAN GARSNSSLFV IVLTDGASTD
     RAATLTQANL LKATGATVVA VGVGSGVDKA ELNSIASDPN HVFNAQNFDA LQTLKEDVKK
     AACDGINTTM VAVPSTTPFV PSTSPIVLGD YSNARGTLIG ALFANLGIST RELSKDKEMD
     LRTHYSCWLS KPLPPDLPFG RLLCFEKTRG CSDNSLERQI RDIFKVLVPL LKNQSTTIIT
     PLLSTGNQHS DEITVLQSIV TGAISWIQAG LPLKKLKIVL YEDNNKELNS KFAKLKQTHL
     KSQRKRQAVK EYDIFLMHQP TDATIVSSLK QNLLAKNDKL SIYYDPSKFD QKGVWQQEIF
     DLMMGSKRIV PVLTPNFVKS DECLEMFNMA ICCTRRKGKD FLVPLYFETI QIIPVSISLV
     QFLDCRVRKE GDTPALKMES VCTRLMLTET EGGESNVSQA DDNVNHDVFI SYAHKDPKQA
     QLLLDEFEKQ YPDMEVFFDR QDLKVGGMWQ KGLYYSLDTV KCVVALVSPS YLSSVVCQEE
     FNIAIYRSQN KANVASWVKA NKRPNYCSNT ASKVALFDFK RMSEIRKKEV YDSYNIKTNS
     VERKSSFSVP PLDQSENHVV VSVSQNDLSL ATSLLYQLEK KSPDIQTSLI VDRTGTDLKC
     LQTSQKIVVF LSKQYLESPH HLEELFISII RQRNERGRKV LYLCQASQLA DKPSFAHLLP
     TDINLRDPFW NGMFTESTKT VKLSLRDLQG SFTYRSQDFA AMTKLADDIL LEIAGLTQAK
     PSPIIVNGIQ ENSAVPLELS QCLVKMTDTP QSFDNSRLPR TADESNDPNK EQAPVPLQSS
     ARQEDAKPDR EHAPVTSPND PPPEDTKSKD PDTAPELTTS PNNPPQESES IPPVSDHSPS
     KDARTRSEKK SSSCNIL
//