ID K1R751_CRAGI Unreviewed; 721 AA.
AC K1R751;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=Nuclear pore complex protein Nup88 {ECO:0000313|EMBL:EKC41573.1};
GN ORFNames=CGI_10022124 {ECO:0000313|EMBL:EKC41573.1};
OS Crassostrea gigas (Pacific oyster) (Crassostrea angulata).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
OC Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Crassostrea.
OX NCBI_TaxID=29159 {ECO:0000313|EMBL:EKC41573.1};
RN [1] {ECO:0000313|EMBL:EKC41573.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=05x7-T-G4-1.051#20 {ECO:0000313|EMBL:EKC41573.1};
RX PubMed=22992520; DOI=10.1038/nature11413;
RA Zhang G., Fang X., Guo X., Li L., Luo R., Xu F., Yang P., Zhang L.,
RA Wang X., Qi H., Xiong Z., Que H., Xie Y., Holland P.W., Paps J., Zhu Y.,
RA Wu F., Chen Y., Wang J., Peng C., Meng J., Yang L., Liu J., Wen B.,
RA Zhang N., Huang Z., Zhu Q., Feng Y., Mount A., Hedgecock D., Xu Z., Liu Y.,
RA Domazet-Loso T., Du Y., Sun X., Zhang S., Liu B., Cheng P., Jiang X.,
RA Li J., Fan D., Wang W., Fu W., Wang T., Wang B., Zhang J., Peng Z., Li Y.,
RA Li N., Wang J., Chen M., He Y., Tan F., Song X., Zheng Q., Huang R.,
RA Yang H., Du X., Chen L., Yang M., Gaffney P.M., Wang S., Luo L., She Z.,
RA Ming Y., Huang W., Zhang S., Huang B., Zhang Y., Qu T., Ni P., Miao G.,
RA Wang J., Wang Q., Steinberg C.E., Wang H., Li N., Qian L., Zhang G., Li Y.,
RA Yang H., Liu X., Wang J., Yin Y., Wang J.;
RT "The oyster genome reveals stress adaptation and complexity of shell
RT formation.";
RL Nature 490:49-54(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus, nuclear pore complex
CC {ECO:0000256|ARBA:ARBA00004567}.
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DR EMBL; JH823226; EKC41573.1; -; Genomic_DNA.
DR AlphaFoldDB; K1R751; -.
DR HOGENOM; CLU_017144_0_0_1; -.
DR InParanoid; K1R751; -.
DR OMA; AYSCPIH; -.
DR GO; GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
DR GO; GO:0017056; F:structural constituent of nuclear pore; IEA:InterPro.
DR GO; GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR GO; GO:0000055; P:ribosomal large subunit export from nucleus; IEA:InterPro.
DR GO; GO:0000056; P:ribosomal small subunit export from nucleus; IEA:InterPro.
DR InterPro; IPR019321; Nucleoporin_Nup88.
DR InterPro; IPR037700; NUP88/NUP82.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR13257:SF0; NUCLEAR PORE COMPLEX PROTEIN NUP88; 1.
DR PANTHER; PTHR13257; NUCLEOPORIN NUP84-RELATED; 1.
DR Pfam; PF10168; Nup88; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
PE 4: Predicted;
KW mRNA transport {ECO:0000256|ARBA:ARBA00022816};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Translocation {ECO:0000256|ARBA:ARBA00023010};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
SQ SEQUENCE 721 AA; 81871 MW; 2DAC1978B67F8555 CRC64;
MAGVDNWRTC LNELKIFKQL RENNCTDSIQ KRKLHSKSLV QVLDSDVYVW DGYAAQLLNY
NLKNFSDSPD KKSRSQTLLC TDPPRFDVDG IDFNQSKSFL AIWGSSGVMV LEMPQRWGKY
SEFEGGKPAV TCKTTSVAEH YFTSHKSVQL LQVAWHPGSE TDSHMTLLTS DNLLSTYDLR
EPDVPIHIVT LGDSLQDLTD SPSKTSYRAA LGDVAASFDF GPPVELKRKN RFHSTLTSPD
VVWPAYIVFG NGDVVIAYTD LSPDPSSIQK LSLQGPLVML PPAEDNYGVD ACSIAVLGTV
PSVLVIGTRD GKLHHCLVMQ SSLEDTNLQS ETQSVISTDT SLLYEAPDDV SLYVYESVEL
ELSLTTTSLK TEEFIEDTFT CPIKIIKDPM APDRYHCIHS AGVHTIVLPW IQEYQKFFAD
SENVPEQEDC IVEHLICTKP LPSSPVAPVL GLGLVRGLSV EPSLLTLTWD YELVSLPLCP
SRYRDSAGPL HTDEDPTTIE SPLRRLSREP FDLYIKKILQ RNVTNPKLKF DKKTEISQQE
CFQLLTRATQ VFREEYLQKQ EHAQQEIQKR TRMLRSLRAQ QEGDVRSLEV SRNHVRNMAE
SLATKYSDCQ DKQEEILQRI EEVMRRLQEK MPMMSEAERG MKRELETMEE QLEIYKRSLD
QLKIKQDYQR RQISQTPNRQ LSSPSLKSSQ LKQLREVLQQ EGDDLGNLLK RVNSLKLEAG
V
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