ID K3XEF1_SETIT Unreviewed; 868 AA.
AC K3XEF1;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=LisH domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=101786998 {ECO:0000313|EnsemblPlants:KQL04658};
GN ORFNames=SETIT_5G125300v2 {ECO:0000313|EMBL:RCV24923.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EMBL:RCV24923.1};
RN [1] {ECO:0000313|EMBL:RCV24923.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL04658,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV24923.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV24923.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV24923.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQL04658}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL04658};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; AGNK02002894; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003532; RCV24923.1; -; Genomic_DNA.
DR RefSeq; XP_004968403.1; XM_004968346.2.
DR AlphaFoldDB; K3XEF1; -.
DR STRING; 4555.K3XEF1; -.
DR EnsemblPlants; KQL04658; KQL04658; SETIT_000268mg.
DR GeneID; 101786998; -.
DR Gramene; KQL04658; KQL04658; SETIT_000268mg.
DR KEGG; sita:101786998; -.
DR eggNOG; KOG0266; Eukaryota.
DR HOGENOM; CLU_000288_57_28_1; -.
DR InParanoid; K3XEF1; -.
DR OMA; KQRFTEN; -.
DR OrthoDB; 401223at2759; -.
DR Proteomes; UP000004995; Chromosome V.
DR GO; GO:0003714; F:transcription corepressor activity; IEA:InterPro.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR044716; LEUNIG-like.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR44376:SF28; TRANSCRIPTIONAL COREPRESSOR LEUNIG; 1.
DR PANTHER; PTHR44376; TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8; 1.
DR Pfam; PF08513; LisH; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00667; LisH; 1.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50896; LISH; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 3.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 579..620
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 621..662
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 664..706
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 828..860
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 111..164
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 179..214
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 226..247
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 446..501
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 111..152
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 458..501
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 868 AA; 95782 MW; 7B766B376E65DD70 CRC64;
MAQNVWEADK MLDSYIYDYL LKRNMQNTAK AFQAESNVPS DPVAIDAPGG FLFEWWSVFW
DIFIARTNEK HSDSAAAYLE SIKAREQQQQ SQQQVEVQQL LLQRHVQQQQ QHSQEQQQQQ
HPQLQQRQQK QQQRNENTDF STSAQNGTVA ADPPARQNAA AASGLSAKLY EDRTKITAQR
DVSDEASMKQ RLAERTGPLL EANPTSMLKS PARSALASGQ IFHRSTGGLS GSLQQAQARS
QPLLGSTQDM KAETNVALNL RAGADGSLFG VPGSNQAGNN LTLKGWPLTG LEQLRSGFLQ
HKSYMHSPQP LQHQLQFLTP QQQQVLLQAQ QNMTASPVEM ENRRLRMLFS SRNLVPGRDG
QSNAFTEIIP SVGQSLQNLC LPMQRTETDM LMKKIAALQQ QQQSSSQQQL LQHPLLNQQQ
QSSNYHAGEL EKMGAGIVTV AFHGHDQVSK NQKGRKRKQP ISSSGPANSS GTMNTAGASP
SSTPSTPSAH SPGDTISTPP LLHNASLSKA LIVYGSEPLV PTASPANSLV DMDHYVEDDS
MEDNNVEPIL SHDDMDLRSA GSHCINSAKG YILREMSSAQ ASTSSVLCCH FSSDGKLLAT
GGQDKKVFLW NAETLKQKSI LEEHSLLITD VRFSPSTPHL ATSSFDKTVR VWDADNQDYS
IRTFTGHSAS VMSLDFHPNK DDLICSCDGD NEIRFWNIKH GNNVRIFKGG STQLRFQPRY
GGYLATASDN MVSILDVETQ ACVRRFESHT NHVDSLCWDP TGGYIVSVSE DMVKMWSLNE
ESCVNELNCS GRKFSSCAFH PTYPSLLVIG CYQSLELWDM AENRSMTIAA HDSLISAVAS
SSSGLVASTG HDKYVKLWRL GHLRHAAP
//
