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Database: UniProt
Entry: K3Y518_SETIT
LinkDB: K3Y518_SETIT
Original site: K3Y518_SETIT 
ID   K3Y518_SETIT            Unreviewed;       918 AA.
AC   K3Y518;
DT   28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT   28-NOV-2012, sequence version 1.
DT   24-JAN-2024, entry version 63.
DE   RecName: Full=Clp R domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   Name=101754798 {ECO:0000313|EnsemblPlants:KQK97029};
GN   ORFNames=SETIT_7G079600v2 {ECO:0000313|EMBL:RCV33374.1};
OS   Setaria italica (Foxtail millet) (Panicum italicum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX   NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQK97029, ECO:0000313|Proteomes:UP000004995};
RN   [1] {ECO:0000313|EMBL:RCV33374.1, ECO:0000313|Proteomes:UP000004995}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQK97029,
RC   ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC   {ECO:0000313|EMBL:RCV33374.1};
RX   PubMed=22580951; DOI=10.1038/nbt.2196;
RA   Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA   Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA   Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA   Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA   Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA   Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT   "Reference genome sequence of the model plant Setaria.";
RL   Nat. Biotechnol. 30:555-561(2012).
RN   [2] {ECO:0000313|EMBL:RCV33374.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Yugu1 {ECO:0000313|EMBL:RCV33374.1};
RA   Noorani M.;
RL   Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblPlants:KQK97029}
RP   IDENTIFICATION.
RC   STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQK97029};
RG   EnsemblPlants;
RL   Submitted (AUG-2018) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC       {ECO:0000256|RuleBase:RU004432}.
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DR   EMBL; AGNK02004315; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CM003534; RCV33374.1; -; Genomic_DNA.
DR   RefSeq; XP_004975455.1; XM_004975398.3.
DR   AlphaFoldDB; K3Y518; -.
DR   STRING; 4555.K3Y518; -.
DR   EnsemblPlants; KQK97029; KQK97029; SETIT_009306mg.
DR   GeneID; 101754798; -.
DR   Gramene; KQK97029; KQK97029; SETIT_009306mg.
DR   KEGG; sita:101754798; -.
DR   eggNOG; KOG1051; Eukaryota.
DR   HOGENOM; CLU_005070_4_1_1; -.
DR   InParanoid; K3Y518; -.
DR   OMA; CCTLRAP; -.
DR   OrthoDB; 275944at2759; -.
DR   Proteomes; UP000004995; Chromosome VII.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR   Gene3D; 1.10.8.60; -; 2.
DR   Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   Gene3D; 4.10.860.10; UVR domain; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR019489; Clp_ATPase_C.
DR   InterPro; IPR036628; Clp_N_dom_sf.
DR   InterPro; IPR004176; Clp_R_dom.
DR   InterPro; IPR001270; ClpA/B.
DR   InterPro; IPR018368; ClpA/B_CS1.
DR   InterPro; IPR028299; ClpA/B_CS2.
DR   InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR001943; UVR_dom.
DR   PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR   PANTHER; PTHR11638:SF155; CLP PROTEASE ATP-BINDING SUBUNIT; 1.
DR   Pfam; PF00004; AAA; 1.
DR   Pfam; PF07724; AAA_2; 1.
DR   Pfam; PF17871; AAA_lid_9; 1.
DR   Pfam; PF02861; Clp_N; 2.
DR   Pfam; PF10431; ClpB_D2-small; 1.
DR   PRINTS; PR00300; CLPPROTEASEA.
DR   SMART; SM00382; AAA; 2.
DR   SMART; SM01086; ClpB_D2-small; 1.
DR   SUPFAM; SSF81923; Double Clp-N motif; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51903; CLP_R; 1.
DR   PROSITE; PS00870; CLPAB_1; 1.
DR   PROSITE; PS00871; CLPAB_2; 1.
DR   PROSITE; PS50151; UVR; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW   Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW   ECO:0000256|RuleBase:RU004432};
KW   Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW   ProRule:PRU01251}.
FT   DOMAIN          88..230
FT                   /note="Clp R"
FT                   /evidence="ECO:0000259|PROSITE:PS51903"
FT   DOMAIN          505..540
FT                   /note="UVR"
FT                   /evidence="ECO:0000259|PROSITE:PS50151"
SQ   SEQUENCE   918 AA;  101757 MW;  66A5AA6470FECBEA CRC64;
     MEGTLVQSAI VPTVLHRSSS GRSRVRARAT MLRSTPTRTL TLGGFQGLRQ TNFLDTRSVV
     KRDFGYIVAS QISRPRGSAS RGVVRAMFER FTEKAIKVVM LAQEEARRLG HNFVGTEQIL
     LGLIGEGTGI AAKVLKSMGI NLKDARVEVE KIIGRGSGFV AVEIPFTPRA KRVLELSLEE
     ARQLGHNYIG SEHLLLGLLR EGEGVAARVL ESLGADPNNI RTQVIRMVGE STEAVGAGVG
     GGTSGQKMPT LEEYGTNLTK LAEEGKLDPV VGRQNQIERV TQILGRRTKN NPCLIGEPGV
     GKTAIAEGLA QRIANGDVPE TIEGKKVITL DMGLLVAGTK YRGEFEERLK KLMEEIKQNE
     DIILFIDEVH TLIGAGAAEG AIDAANILKP ALARGELQCI GATTLDEYRK HIEKDPALER
     RFQPVKVPEP TVDETTQILR GLRERYELHH KLRYTDEALV AAAQLSYQYI SDRFLPDKAI
     DLIDEAGSRV RLRHAQLPDE AKELDKELRQ ITKQKNEAVR GQDFEKAGEL RDREMELKAQ
     ITAIIDKSKE MIKAETESGE VGPLVTEADI QHIVSSWTGI PVEKVSADES DRLLKMEETL
     HTRIIGQDEA VKAISRAIRR ARVGLKNPNR PIASFIFSGP TGVGKSELAK SLAAYYFGSE
     EAMIRLDMSE FMERHTVAKL IGSPPGYVGY TEGGQLTEAV RRRPYTVVLF DEIEKAHPDV
     FNMMLQILED GRLTDSKGRT VDFKNTLLIM TSNVGSSVIE KGGRKIGFDL DYDEKDSSYT
     RIKSLVTEEL KQYFRPEFLN RLDEMIVFRQ LTKLEVKEIA DIMLKEVFNR LKAKDIDLQV
     TERFRDRVVD EGYNPSYGAR PLRRAIMRLL EDSLAEKMLA GEVKEGDSAI VDVDSEGKVI
     VLNGGSGVPE PLEPALSV
//
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