ID K3Y518_SETIT Unreviewed; 918 AA.
AC K3Y518;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 24-JAN-2024, entry version 63.
DE RecName: Full=Clp R domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=101754798 {ECO:0000313|EnsemblPlants:KQK97029};
GN ORFNames=SETIT_7G079600v2 {ECO:0000313|EMBL:RCV33374.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQK97029, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EMBL:RCV33374.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQK97029,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV33374.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV33374.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV33374.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK97029}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQK97029};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|RuleBase:RU004432}.
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DR EMBL; AGNK02004315; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003534; RCV33374.1; -; Genomic_DNA.
DR RefSeq; XP_004975455.1; XM_004975398.3.
DR AlphaFoldDB; K3Y518; -.
DR STRING; 4555.K3Y518; -.
DR EnsemblPlants; KQK97029; KQK97029; SETIT_009306mg.
DR GeneID; 101754798; -.
DR Gramene; KQK97029; KQK97029; SETIT_009306mg.
DR KEGG; sita:101754798; -.
DR eggNOG; KOG1051; Eukaryota.
DR HOGENOM; CLU_005070_4_1_1; -.
DR InParanoid; K3Y518; -.
DR OMA; CCTLRAP; -.
DR OrthoDB; 275944at2759; -.
DR Proteomes; UP000004995; Chromosome VII.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 2.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 4.10.860.10; UVR domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001943; UVR_dom.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF155; CLP PROTEASE ATP-BINDING SUBUNIT; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
DR PROSITE; PS50151; UVR; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 88..230
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT DOMAIN 505..540
FT /note="UVR"
FT /evidence="ECO:0000259|PROSITE:PS50151"
SQ SEQUENCE 918 AA; 101757 MW; 66A5AA6470FECBEA CRC64;
MEGTLVQSAI VPTVLHRSSS GRSRVRARAT MLRSTPTRTL TLGGFQGLRQ TNFLDTRSVV
KRDFGYIVAS QISRPRGSAS RGVVRAMFER FTEKAIKVVM LAQEEARRLG HNFVGTEQIL
LGLIGEGTGI AAKVLKSMGI NLKDARVEVE KIIGRGSGFV AVEIPFTPRA KRVLELSLEE
ARQLGHNYIG SEHLLLGLLR EGEGVAARVL ESLGADPNNI RTQVIRMVGE STEAVGAGVG
GGTSGQKMPT LEEYGTNLTK LAEEGKLDPV VGRQNQIERV TQILGRRTKN NPCLIGEPGV
GKTAIAEGLA QRIANGDVPE TIEGKKVITL DMGLLVAGTK YRGEFEERLK KLMEEIKQNE
DIILFIDEVH TLIGAGAAEG AIDAANILKP ALARGELQCI GATTLDEYRK HIEKDPALER
RFQPVKVPEP TVDETTQILR GLRERYELHH KLRYTDEALV AAAQLSYQYI SDRFLPDKAI
DLIDEAGSRV RLRHAQLPDE AKELDKELRQ ITKQKNEAVR GQDFEKAGEL RDREMELKAQ
ITAIIDKSKE MIKAETESGE VGPLVTEADI QHIVSSWTGI PVEKVSADES DRLLKMEETL
HTRIIGQDEA VKAISRAIRR ARVGLKNPNR PIASFIFSGP TGVGKSELAK SLAAYYFGSE
EAMIRLDMSE FMERHTVAKL IGSPPGYVGY TEGGQLTEAV RRRPYTVVLF DEIEKAHPDV
FNMMLQILED GRLTDSKGRT VDFKNTLLIM TSNVGSSVIE KGGRKIGFDL DYDEKDSSYT
RIKSLVTEEL KQYFRPEFLN RLDEMIVFRQ LTKLEVKEIA DIMLKEVFNR LKAKDIDLQV
TERFRDRVVD EGYNPSYGAR PLRRAIMRLL EDSLAEKMLA GEVKEGDSAI VDVDSEGKVI
VLNGGSGVPE PLEPALSV
//