ID K3Y7Q1_SETIT Unreviewed; 408 AA.
AC K3Y7Q1;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 24-JAN-2024, entry version 52.
DE RecName: Full=MBD domain-containing protein {ECO:0000259|PROSITE:PS50982};
GN Name=101761695 {ECO:0000313|EnsemblPlants:KQK96442};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQK96442, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EnsemblPlants:KQK96442, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQK96442,
RC ECO:0000313|Proteomes:UP000004995};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EnsemblPlants:KQK96442}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQK96442};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; AGNK02004133; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_012703239.1; XM_012847785.1.
DR AlphaFoldDB; K3Y7Q1; -.
DR STRING; 4555.K3Y7Q1; -.
DR EnsemblPlants; KQK96442; KQK96442; SETIT_010242mg.
DR GeneID; 101761695; -.
DR Gramene; KQK96442; KQK96442; SETIT_010242mg.
DR KEGG; sita:101761695; -.
DR eggNOG; ENOG502QS50; Eukaryota.
DR HOGENOM; CLU_034600_0_0_1; -.
DR InParanoid; K3Y7Q1; -.
DR OMA; LASNNCM; -.
DR OrthoDB; 509339at2759; -.
DR Proteomes; UP000004995; Chromosome VII.
DR ExpressionAtlas; K3Y7Q1; baseline.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR InterPro; IPR038945; MBD13-like.
DR InterPro; IPR001739; Methyl_CpG_DNA-bd.
DR PANTHER; PTHR34067; OS04G0193200 PROTEIN; 1.
DR PANTHER; PTHR34067:SF9; OS04G0266400 PROTEIN; 1.
DR Pfam; PF01429; MBD; 1.
DR SUPFAM; SSF54171; DNA-binding domain; 2.
DR PROSITE; PS50982; MBD; 2.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 51..123
FT /note="MBD"
FT /evidence="ECO:0000259|PROSITE:PS50982"
FT DOMAIN 125..206
FT /note="MBD"
FT /evidence="ECO:0000259|PROSITE:PS50982"
FT REGION 232..386
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 232..253
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 287..313
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 320..336
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 338..353
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 365..385
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 408 AA; 46295 MW; 4273C70C61D3C05A CRC64;
MEVCRDDGGS IYRCYTSPVS GCTFTSKMET LDYLFSGMEE RMLESQESAE DNELLGSHTW
LPGGWLIEVR AGGKKMNKMY KFYFHPPTGM RFLSKAEVLH YVNEGKISAS DMDVLCDTRT
DDNILAHVEF NPDGLPDGWV KETIFRNCND GIRKDPYYTD PISRRVFRTL KSVLSYLGTG
EISKHAYLPR RNVIDMYSFD KCVDLPQSML KRLRAEGQTK QKSRRALVLY KELPNNQTSN
HSEGGTSAGL TPKSDLKRNK FGTEKATATN ENGSETTKRR RGRPKKILKQ TNESISDCDK
RHKEAKHNEV KEEVDICDEE DMPNGKTKKH TEMQKRTPVI QEVGNNNNIA ESNSLKRKEN
RSDLVASPGL QNQENGRSTE AGKKATCSSV HKFYKRRCSN QTVSSNKG
//
