ID K3Y8C9_SETIT Unreviewed; 352 AA.
AC K3Y8C9;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=TFIIS N-terminal domain-containing protein {ECO:0000259|PROSITE:PS51319};
GN Name=101773441 {ECO:0000313|EnsemblPlants:KQK99567};
GN ORFNames=SETIT_7G292500v2 {ECO:0000313|EMBL:RCV36096.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQK99567, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EMBL:RCV36096.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQK99567,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV36096.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV36096.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV36096.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK99567}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQK99567};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00649}.
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DR EMBL; AGNK02004556; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003534; RCV36096.1; -; Genomic_DNA.
DR RefSeq; XP_004977300.1; XM_004977243.2.
DR AlphaFoldDB; K3Y8C9; -.
DR STRING; 4555.K3Y8C9; -.
DR EnsemblPlants; KQK99567; KQK99567; SETIT_010470mg.
DR GeneID; 101773441; -.
DR Gramene; KQK99567; KQK99567; SETIT_010470mg.
DR KEGG; sita:101773441; -.
DR eggNOG; ENOG502QTFQ; Eukaryota.
DR InParanoid; K3Y8C9; -.
DR OMA; HQNTHAS; -.
DR OrthoDB; 4793at2759; -.
DR Proteomes; UP000004995; Chromosome VII.
DR ExpressionAtlas; K3Y8C9; baseline.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR CDD; cd00183; TFIIS_I; 1.
DR Gene3D; 1.20.930.10; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR InterPro; IPR044790; MD26C-like.
DR InterPro; IPR003617; TFIIS/CRSP70_N_sub.
DR InterPro; IPR035441; TFIIS/LEDGF_dom_sf.
DR InterPro; IPR017923; TFIIS_N.
DR PANTHER; PTHR47210; MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED; 1.
DR PANTHER; PTHR47210:SF1; OS12G0165700 PROTEIN; 1.
DR Pfam; PF08711; Med26; 1.
DR SMART; SM00509; TFS2N; 1.
DR SUPFAM; SSF47676; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR PROSITE; PS51319; TFIIS_N; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00649}; Reference proteome {ECO:0000313|Proteomes:UP000004995}.
FT DOMAIN 115..186
FT /note="TFIIS N-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51319"
FT REGION 66..108
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 193..275
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 325..352
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 211..252
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 260..275
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 352 AA; 38557 MW; D2083CA21F9FEB34 CRC64;
MTAAGMGSDG RLRRALAAFG GGGDVWDLVD AALTAAARDN PDELRARRDG IVERLYAGAR
CHNCDAGAPS PPQPRKAPEA AAAAEAVSPV SPDEEVDADG LGEDDDDAGV ESKILAIRDF
LEDPDQSEDE MVSLLQNLAD MDITYKALQE TDIGRHVNGL RKHPSGEVRQ LVKLLVRKWK
EIVDDWVRLH NSAGDGGSSI ISDGDSPDKV QPKNHQSTKA SDFKYSPSPQ SHNGFSSERS
IYQNSVESTM EKRRTSPAPA YHNTKPNNNS NYSTTSSSVL ARTMREQKYT LMDPGKLDSA
RKRLQENYQE AQNAKKQRTI QVMDIHDIPK PKNRNTFIRK SSGGGGLPAR HR
//
