ID K3Y9R3_SETIT Unreviewed; 238 AA.
AC K3Y9R3;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE RecName: Full=MSP domain-containing protein {ECO:0000259|PROSITE:PS50202};
GN Name=101771025 {ECO:0000313|EnsemblPlants:KQK98390};
GN ORFNames=SETIT_7G192400v2 {ECO:0000313|EMBL:RCV34865.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQK98390, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EMBL:RCV34865.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQK98390,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV34865.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV34865.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV34865.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK98390}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQK98390};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SIMILARITY: Belongs to the VAMP-associated protein (VAP) (TC 9.B.17)
CC family. {ECO:0000256|ARBA:ARBA00008932}.
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DR EMBL; AGNK02004464; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003534; RCV34865.1; -; Genomic_DNA.
DR RefSeq; XP_004976452.1; XM_004976395.3.
DR AlphaFoldDB; K3Y9R3; -.
DR STRING; 4555.K3Y9R3; -.
DR EnsemblPlants; KQK98390; KQK98390; SETIT_010955mg.
DR GeneID; 101771025; -.
DR Gramene; KQK98390; KQK98390; SETIT_010955mg.
DR KEGG; sita:101771025; -.
DR eggNOG; KOG0439; Eukaryota.
DR HOGENOM; CLU_036554_1_2_1; -.
DR InParanoid; K3Y9R3; -.
DR OMA; CEEKRSH; -.
DR OrthoDB; 376139at2759; -.
DR Proteomes; UP000004995; Chromosome VII.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IBA:GO_Central.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0090158; P:endoplasmic reticulum membrane organization; IBA:GO_Central.
DR GO; GO:0061817; P:endoplasmic reticulum-plasma membrane tethering; IBA:GO_Central.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR000535; MSP_dom.
DR InterPro; IPR008962; PapD-like_sf.
DR InterPro; IPR016763; VAP.
DR PANTHER; PTHR10809:SF160; OS04G0554200 PROTEIN; 1.
DR PANTHER; PTHR10809; VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN; 1.
DR Pfam; PF00635; Motile_Sperm; 1.
DR PIRSF; PIRSF019693; VAMP-associated; 1.
DR SUPFAM; SSF49354; PapD-like; 1.
DR PROSITE; PS50202; MSP; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 214..233
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 5..125
FT /note="MSP"
FT /evidence="ECO:0000259|PROSITE:PS50202"
SQ SEQUENCE 238 AA; 26923 MW; 08DC4A85E4F207FC CRC64;
MSSKLLRVYP SELKIPYEMK KQRSCCMQLT NRTDQFVAFK VKTTNPRKYS VRHSCGIVLP
RGSCNVTVIM QAPMEMLLDH QCKDKFLVQS VVVKDRATIK DFGPQLFTKA PGRVIEEFKL
RVVYIAANPP SPVPEEEEEE DSSPRSEVVC GVKTSSTFDA EHRCIGASAA EPSCPEGTSV
ISELVQEREY VDKHQKLQQD MELLGETRSS QQGFSLMFVV FVFMSSMFIG HLMNEIKV
//
