ID K3YCK6_SETIT Unreviewed; 499 AA.
AC K3YCK6;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=DNA repair metallo-beta-lactamase domain-containing protein {ECO:0000259|Pfam:PF07522};
GN ORFNames=SETIT_7G082900v2 {ECO:0000313|EMBL:RCV33429.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EMBL:RCV33429.1};
RN [1] {ECO:0000313|EMBL:RCV33429.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQK97071,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV33429.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV33429.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV33429.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK97071}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQK97071};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the DNA repair metallo-beta-lactamase (DRMBL)
CC family. {ECO:0000256|ARBA:ARBA00010304}.
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DR EMBL; AGNK02004319; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003534; RCV33428.1; -; Genomic_DNA.
DR EMBL; CM003534; RCV33429.1; -; Genomic_DNA.
DR EMBL; CM003534; RCV33430.1; -; Genomic_DNA.
DR EMBL; CM003534; RCV33431.1; -; Genomic_DNA.
DR AlphaFoldDB; K3YCK6; -.
DR STRING; 4555.K3YCK6; -.
DR EnsemblPlants; KQK97071; KQK97071; SETIT_011955mg.
DR Gramene; KQK97071; KQK97071; SETIT_011955mg.
DR eggNOG; KOG1361; Eukaryota.
DR HOGENOM; CLU_005260_2_2_1; -.
DR InParanoid; K3YCK6; -.
DR OMA; KSGPIYC; -.
DR Proteomes; UP000004995; Chromosome VII.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0035312; F:5'-3' DNA exonuclease activity; IBA:GO_Central.
DR GO; GO:0003684; F:damaged DNA binding; IBA:GO_Central.
DR GO; GO:0006303; P:double-strand break repair via nonhomologous end joining; IBA:GO_Central.
DR GO; GO:0036297; P:interstrand cross-link repair; IBA:GO_Central.
DR CDD; cd16273; SNM1A-1C-like_MBL-fold; 1.
DR Gene3D; 3.40.50.12650; -; 1.
DR Gene3D; 3.60.15.10; Ribonuclease Z/Hydroxyacylglutathione hydrolase-like; 1.
DR InterPro; IPR011084; DRMBL.
DR InterPro; IPR036866; RibonucZ/Hydroxyglut_hydro.
DR PANTHER; PTHR23240; DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED; 1.
DR PANTHER; PTHR23240:SF37; DNA CROSS-LINK REPAIR PROTEIN SNM1; 1.
DR Pfam; PF07522; DRMBL; 1.
DR SUPFAM; SSF56281; Metallo-hydrolase/oxidoreductase; 1.
PE 3: Inferred from homology;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000004995}.
FT DOMAIN 386..480
FT /note="DNA repair metallo-beta-lactamase"
FT /evidence="ECO:0000259|Pfam:PF07522"
FT REGION 1..77
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 119..154
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 499 AA; 55231 MW; 4DDA336F7E76B855 CRC64;
MATAGGDADP PQPFPADLDD NGFPSLPSPP AAAGSTSVFA EDFYRSGTDW SSLRDPPPRR
PPEGPPGVKA KEKEGASLVQ SSLFQAWGIE RPRREGGAAG HSSPVQKSLF QAWGIERPKR
EGVGAGDPCP SPIRSGSWSG RKRQRGGPGE AAPAAMNPRT CPFYKKIPGT PFTVDAFRYG
EVEGCSAYFL SHFHHDHYGG LTKKWCHGPI FCSALTARLV KMCLSVNSDY ICPLELDTEY
VIEGVTVTLL EANHCPGAAL IHFRLSDGKT YLHTGDFRAS RSMQLHPLLQ RGRVNLLYLD
TTYCNPKYKF PPQEDVIDFV VRTARRYLAK QPKTLIVVGA YSIGKENVYL AISQALDVPI
YTDASRRRIL HSFDWPDLSK RICSCNQSSL HVLPLGSVNH ENLKKYLETL NQKFVAVLAF
RPTGWTFSEA TGKQLDLIKP SSNGSVTIYG VPYSEHSSFT ELRDFVMFLR PQVIRSVNVG
NVASRDKMQA YFREWLKGS
//