ID K3YEP1_SETIT Unreviewed; 730 AA.
AC K3YEP1;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 24-JAN-2024, entry version 60.
DE RecName: Full=Homeobox domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQK96835, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EnsemblPlants:KQK96835, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQK96835,
RC ECO:0000313|Proteomes:UP000004995};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EnsemblPlants:KQK96835}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQK96835};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC -!- SIMILARITY: Belongs to the HD-ZIP homeobox family. Class IV subfamily.
CC {ECO:0000256|ARBA:ARBA00006789}.
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DR EMBL; AGNK02004270; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; K3YEP1; -.
DR EnsemblPlants; KQK96835; KQK96835; SETIT_012707mg.
DR Gramene; KQK96835; KQK96835; SETIT_012707mg.
DR eggNOG; ENOG502QUAY; Eukaryota.
DR HOGENOM; CLU_015002_2_1_1; -.
DR InParanoid; K3YEP1; -.
DR OMA; WINHMEE; -.
DR Proteomes; UP000004995; Chromosome VII.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0008289; F:lipid binding; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR CDD; cd08875; START_ArGLABRA2_like; 1.
DR Gene3D; 3.30.530.20; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR042160; GLABRA2/ANL2/PDF2/ATML1-like.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR000047; HTH_motif.
DR InterPro; IPR023393; START-like_dom_sf.
DR InterPro; IPR002913; START_lipid-bd_dom.
DR PANTHER; PTHR45654; HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1; 1.
DR PANTHER; PTHR45654:SF37; HOMEODOMAIN LEUCINE ZIPPER FAMILY IV PROTEIN; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR Pfam; PF01852; START; 1.
DR PRINTS; PR00031; HTHREPRESSR.
DR SMART; SM00389; HOX; 1.
DR SMART; SM00234; START; 1.
DR SUPFAM; SSF55961; Bet v1-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
DR PROSITE; PS50848; START; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 50..110
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DOMAIN 202..460
FT /note="START"
FT /evidence="ECO:0000259|PROSITE:PS50848"
FT DNA_BIND 52..111
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 35..58
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 730 AA; 80631 MW; 9F501D8BD42C4B0B CRC64;
MGLNPGNETA YPNWINHMEE YDIDALLGAE DHVNTDQDED DEEHHHDGSK SSKRGKNRFT
AKQIEQLESL FQLSAHPDDP TRQELADKIG LEARQVKFWF QNRRTKTKAK AVGDQNKDIK
QENAQLHAEN MKLQQTLACG RCRDPTEHKW HLLNENARLK DTKRRAQEYL IKLIHDSNLP
HSETLEHLES ASLNLVPFDD NGSTYQATLL SYAERALNEF MMLAVKDEPM WLPTINGKML
HNQEYNCRTC PGLLGPCPQG FVMEATKQTT TVRGTASDLV AMLTDVSCWS KMFPGIIESV
RASKVVSSGI STSRDGLIQE TSVSMMRLIG LTNFIELLQM NVDLWVQSPR APNRSVKFLR
YSKEIENNQW AVVDVSIDGI RGIEPNNGSQ IGYMSCRLLP SGCLLQDMSN GLCKVTWIVH
AEYDETTVSP LFRGLFQSGQ ALGASRWLAS LQRQCEYMAT LHCTHSSGRR GVLDLAQRMM
VSFYTAVSKP VTPGPSNIVN EWHGSCDIGA KTFLATVRMV IWNISTMGQP PALVLCATTT
VWLPGVPPHR VHEYLCNGQR RGEWDKFGYG GAVQELSSIV TCRQLRGNVV SVLQPSDVTV
RANSNMLILQ EATSDLSCSL VVYSFVEKNM MCAVMDGADN SAVFLLPSGF AILPDGHAKA
HRAAAASSSY STPTGQNSTA GSLLTAAYQQ ILPNSISTHA LETLDDAGSR VCQAISQILA
AVGADIAIPA
//
