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Database: UniProt
Entry: K3YPM2_SETIT
LinkDB: K3YPM2_SETIT
Original site: K3YPM2_SETIT 
ID   K3YPM2_SETIT            Unreviewed;       989 AA.
AC   K3YPM2;
DT   28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT   28-NOV-2012, sequence version 1.
DT   24-JAN-2024, entry version 65.
DE   RecName: Full=Clp R domain-containing protein {ECO:0000259|PROSITE:PS51903};
GN   ORFNames=SETIT_1G061300v2 {ECO:0000313|EMBL:RCV05168.1};
OS   Setaria italica (Foxtail millet) (Panicum italicum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX   NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQL28427, ECO:0000313|Proteomes:UP000004995};
RN   [1] {ECO:0000313|EMBL:RCV05168.1, ECO:0000313|Proteomes:UP000004995}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL28427,
RC   ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC   {ECO:0000313|EMBL:RCV05168.1};
RX   PubMed=22580951; DOI=10.1038/nbt.2196;
RA   Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA   Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA   Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA   Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA   Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA   Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT   "Reference genome sequence of the model plant Setaria.";
RL   Nat. Biotechnol. 30:555-561(2012).
RN   [2] {ECO:0000313|EMBL:RCV05168.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Yugu1 {ECO:0000313|EMBL:RCV05168.1};
RA   Noorani M.;
RL   Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblPlants:KQL28427}
RP   IDENTIFICATION.
RC   STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL28427};
RG   EnsemblPlants;
RL   Submitted (AUG-2018) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC       {ECO:0000256|ARBA:ARBA00008675, ECO:0000256|RuleBase:RU004432}.
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DR   EMBL; AGNK02000087; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CM003528; RCV05168.1; -; Genomic_DNA.
DR   AlphaFoldDB; K3YPM2; -.
DR   STRING; 4555.K3YPM2; -.
DR   EnsemblPlants; KQL28427; KQL28427; SETIT_016214mg.
DR   Gramene; KQL28427; KQL28427; SETIT_016214mg.
DR   eggNOG; KOG1051; Eukaryota.
DR   HOGENOM; CLU_005070_4_0_1; -.
DR   InParanoid; K3YPM2; -.
DR   OMA; IDLHYTK; -.
DR   OrthoDB; 35211at2759; -.
DR   Proteomes; UP000004995; Chromosome I.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0005739; C:mitochondrion; IEA:EnsemblPlants.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IBA:GO_Central.
DR   GO; GO:0034605; P:cellular response to heat; IBA:GO_Central.
DR   GO; GO:0042026; P:protein refolding; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR017730; Chaperonin_ClpB.
DR   InterPro; IPR019489; Clp_ATPase_C.
DR   InterPro; IPR036628; Clp_N_dom_sf.
DR   InterPro; IPR004176; Clp_R_dom.
DR   InterPro; IPR001270; ClpA/B.
DR   InterPro; IPR018368; ClpA/B_CS1.
DR   InterPro; IPR028299; ClpA/B_CS2.
DR   InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   NCBIfam; TIGR03346; chaperone_ClpB; 1.
DR   PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR   PANTHER; PTHR11638:SF86; CHAPERONE PROTEIN CLPB4, MITOCHONDRIAL; 1.
DR   Pfam; PF00004; AAA; 1.
DR   Pfam; PF07724; AAA_2; 1.
DR   Pfam; PF17871; AAA_lid_9; 1.
DR   Pfam; PF02861; Clp_N; 2.
DR   Pfam; PF10431; ClpB_D2-small; 1.
DR   PRINTS; PR00300; CLPPROTEASEA.
DR   SMART; SM00382; AAA; 2.
DR   SMART; SM01086; ClpB_D2-small; 1.
DR   SUPFAM; SSF81923; Double Clp-N motif; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51903; CLP_R; 1.
DR   PROSITE; PS00870; CLPAB_1; 1.
DR   PROSITE; PS00871; CLPAB_2; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW   Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW   ECO:0000256|RuleBase:RU004432};
KW   Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW   ProRule:PRU01251}.
FT   DOMAIN          103..246
FT                   /note="Clp R"
FT                   /evidence="ECO:0000259|PROSITE:PS51903"
FT   COILED          512..633
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   989 AA;  109420 MW;  A56C4209C4009F9F CRC64;
     MARSAASRLA RAARAAAAAT ARRQAPGASR EVLPRALAPL AGDASAFAAA ATRRPAWFAA
     PLGRFPVGAG GAGLMAPPRR LFHSTAPAQH SAAGTSSSSQ IAPGEFTEMA WEGIVGAVDA
     ARLSKQQIVE SEHLMKALLE QKDGLARRIF SKAGVDNTSV LQATDEFISR QPKVSGDTSG
     PIIGSSFVSI LDSAKKHKKE YGDEFVSVEH ILQAFTSDKR FGQQLFKDLK IMENDLKEAI
     SAVRGSQRVT DQNPEGKYQA LEKYGIDLTE SARRGKLDPV IGRDDEVRRC IQILCRRTKN
     NPVIIGEPGV GKTAIAEGLA QRIVRGDVPE PLMNRRLISL DMGALLAGAK FRGEFEERLK
     AVLKEVTASN GQIILFIDEI HTVVGAGAAG GAMDAGNLLK PMLGRGELRC IGATTLDEYR
     KYIEKDAALE RRFQQVYCGE PAVEDTISIL RGLRERYELH HGVKISDGAL VAAAVLSDRY
     ITGRFLPDKA IDLVDEAAAK LKMEITSKPI ELDEVDREII RLEMEKLSLK NDTDKASKER
     LSKLEAELES LKQKQKNLSE HWEYEKSLMT RIGSIKEETD RVNLEIEAAE REYDLSRAAE
     LKYGTLLSLQ KQLEEAENKL VEFQQSGKSM LREEVTDVDI AEIVSKWTGI PVSNLQQSER
     EKLLLLEDVL HKRVIGQDIA VKSVANAIRR SRAGLSDPNR PIASFMFMGP TGVGKTELGK
     TLAEFLFNTE NALIRIDMSE YMEKHAVSRL VGAPPGYVGY EEGGQLTESV RRRPYSVVLF
     DEIEKAHQDV FNILLQLLDD GRITDSQGRT VSFTNCVIIM TSNIGSPLIL DTLRNTTDSK
     EAVYEIMKKQ VIEMARQTFR PEFLNRIDEY IVFQPLDTSE INHIVEIQLN RVKNRLKQQK
     IRLQYTPEAV ELLGSLGFDP NYGARPVKRV IQQMVENEIA LGVLKGDFKE DDTILVDVSS
     AAIAKGLAPQ KKLVLQRVEN RSEELVAND
//
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