ID K3YPV4_SETIT Unreviewed; 853 AA.
AC K3YPV4;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE RecName: Full=ZZ-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=101767234 {ECO:0000313|EnsemblPlants:KQL30277};
GN ORFNames=SETIT_1G216500v2 {ECO:0000313|EMBL:RCV07093.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQL30277, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EMBL:RCV07093.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL30277,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV07093.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV07093.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV07093.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQL30277}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL30277};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Cytoplasmic vesicle, autophagosome
CC {ECO:0000256|ARBA:ARBA00004419}.
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DR EMBL; AGNK02000416; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003528; RCV07093.1; -; Genomic_DNA.
DR RefSeq; XP_004952961.1; XM_004952904.2.
DR AlphaFoldDB; K3YPV4; -.
DR STRING; 4555.K3YPV4; -.
DR EnsemblPlants; KQL30277; KQL30277; SETIT_016296mg.
DR GeneID; 101767234; -.
DR Gramene; KQL30277; KQL30277; SETIT_016296mg.
DR KEGG; sita:101767234; -.
DR eggNOG; KOG4351; Eukaryota.
DR eggNOG; KOG4582; Eukaryota.
DR InParanoid; K3YPV4; -.
DR OMA; RNHSEAM; -.
DR OrthoDB; 145583at2759; -.
DR Proteomes; UP000004995; Chromosome I.
DR ExpressionAtlas; K3YPV4; baseline.
DR GO; GO:0005776; C:autophagosome; IEA:UniProtKB-SubCell.
DR GO; GO:0031410; C:cytoplasmic vesicle; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd14947; NBR1_like; 1.
DR CDD; cd14319; UBA_NBR1; 1.
DR Gene3D; 3.30.60.90; -; 1.
DR Gene3D; 1.10.8.10; DNA helicase RuvA subunit, C-terminal domain; 2.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR032350; N_BRCA1_central.
DR InterPro; IPR000270; PB1_dom.
DR InterPro; IPR015940; UBA.
DR InterPro; IPR009060; UBA-like_sf.
DR InterPro; IPR000433; Znf_ZZ.
DR InterPro; IPR043145; Znf_ZZ_sf.
DR PANTHER; PTHR20930:SF10; OS02G0593700 PROTEIN; 1.
DR PANTHER; PTHR20930; OVARIAN CARCINOMA ANTIGEN CA125-RELATED; 1.
DR Pfam; PF16158; N_BRCA1_IG; 1.
DR Pfam; PF00564; PB1; 1.
DR Pfam; PF00569; ZZ; 1.
DR SMART; SM00666; PB1; 1.
DR SMART; SM00291; ZnF_ZZ; 1.
DR SUPFAM; SSF54277; CAD & PB1 domains; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF46934; UBA-like; 2.
DR PROSITE; PS51745; PB1; 1.
DR PROSITE; PS50030; UBA; 1.
DR PROSITE; PS50135; ZF_ZZ_2; 1.
PE 4: Predicted;
KW Cytoplasmic vesicle {ECO:0000256|ARBA:ARBA00023329};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00228}.
FT DOMAIN 23..108
FT /note="PB1"
FT /evidence="ECO:0000259|PROSITE:PS51745"
FT DOMAIN 408..458
FT /note="ZZ-type"
FT /evidence="ECO:0000259|PROSITE:PS50135"
FT DOMAIN 765..803
FT /note="UBA"
FT /evidence="ECO:0000259|PROSITE:PS50030"
FT REGION 106..128
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 198..226
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 292..346
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 731..762
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 207..222
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 311..325
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 331..346
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 733..755
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 853 AA; 92570 MW; B9DDBDE5FB69E869 CRC64;
MSDRSSPAAP TFFPFGPQAE VRDVTFKVKY GDTLKRFYGC VNGAHLDMNL SALRAKIATA
FKFGPDADFI LTYTDEDGDA VMLDDDDDLR DAALRQKLNP LRITVQLKKS QPTEQKERNS
TPVKPTAQDP LSQIMSAIEG LKPAQEESLA HIKSAIGEAI KSIPEPIPDA IAKLSHEVLD
AAPPPLAELM KPFVQMMAPS NGGNGPSDAH AEGSSTSSTR VAEDAPVAVP ATAKPKAKAC
LDLRSVLKDA PVAAPSVEAS QGQQPSMYPS VEELLFPSNS VDKPVCKGKI DAQSKGKSVA
SSATQPASPH AVPIHVPPPP PCVSELFRPR RSQPHQWQSE NNTKVTSDSR WRIPMYKVPY
APPAAVSHAP PGYGPSPHFP YPGRLLSSGH PYGDLAGNME NSAPRSLHRW IQCDGCGVQP
IVGPRFKSNV KEDYDLCNSC FQRMGNEVEY TKIDKPILPH RLLRDPHSYR KVHHPRVVMK
SKREKLESRF ILDVTVLDGT LMTPSTPFTK IWRMHNNGSI VWPLGTQLIW VGGDQFALQT
SVPLEIPVNG FPVDKEIDVA VDFVAPTRPG RYISYWRLAS PSGQKFGQRV WVHIQVEDPS
FVNDNNRNTA INLNLPPEGS SANTTSLIDV NIEPVDPALS AHAKRTKEFH FYPSDVPEPK
KSQPALVVAT SMPAAAPANL VVDVPMSSAT AAAFVPSVSV PAPAPELLAP VGPSPVNVPI
LPTTVPVSMP APASAPASAP APASVPVPPP AASAAAPEPF DIDGHNEEKL LRELEEMGFR
QIDLNKEILR QNNYNLELSV DDLCGVNEWD PLLAELEEMG FDDTEMNKEL LAKNGGSIKR
AVMDLIAREK KDK
//
