ID K3YS29_SETIT Unreviewed; 479 AA.
AC K3YS29;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 24-JAN-2024, entry version 59.
DE RecName: Full=ARID domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=101779773 {ECO:0000313|EnsemblPlants:KQL31213};
GN ORFNames=SETIT_1G295300v2 {ECO:0000313|EMBL:RCV08052.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EMBL:RCV08052.1};
RN [1] {ECO:0000313|EMBL:RCV08052.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL31213,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV08052.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV08052.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV08052.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQL31213}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL31213};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SIMILARITY: Belongs to the small heat shock protein (HSP20) family.
CC {ECO:0000256|PROSITE-ProRule:PRU00285, ECO:0000256|RuleBase:RU003616}.
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DR EMBL; AGNK02000520; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003528; RCV08052.1; -; Genomic_DNA.
DR RefSeq; XP_004953680.1; XM_004953623.1.
DR AlphaFoldDB; K3YS29; -.
DR STRING; 4555.K3YS29; -.
DR EnsemblPlants; KQL31213; KQL31213; SETIT_017073mg.
DR GeneID; 101779773; -.
DR Gramene; KQL31213; KQL31213; SETIT_017073mg.
DR KEGG; sita:101779773; -.
DR eggNOG; KOG2744; Eukaryota.
DR HOGENOM; CLU_029075_2_1_1; -.
DR InParanoid; K3YS29; -.
DR OMA; AMSHDGH; -.
DR OrthoDB; 654178at2759; -.
DR Proteomes; UP000004995; Chromosome I.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd00298; ACD_sHsps_p23-like; 1.
DR CDD; cd16100; ARID; 1.
DR Gene3D; 2.60.40.790; -; 1.
DR Gene3D; 1.10.150.60; ARID DNA-binding domain; 1.
DR InterPro; IPR002068; A-crystallin/Hsp20_dom.
DR InterPro; IPR045147; ARI3A/B/C.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR InterPro; IPR008978; HSP20-like_chaperone.
DR PANTHER; PTHR15348; AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT; 1.
DR PANTHER; PTHR15348:SF4; OS02G0714300 PROTEIN; 1.
DR Pfam; PF01388; ARID; 1.
DR Pfam; PF00011; HSP20; 1.
DR SMART; SM01014; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SUPFAM; SSF46774; ARID-like; 1.
DR SUPFAM; SSF49764; HSP20-like chaperones; 1.
DR PROSITE; PS51011; ARID; 1.
DR PROSITE; PS01031; SHSP; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000004995}.
FT DOMAIN 180..271
FT /note="ARID"
FT /evidence="ECO:0000259|PROSITE:PS51011"
FT DOMAIN 378..479
FT /note="SHSP"
FT /evidence="ECO:0000259|PROSITE:PS01031"
FT REGION 1..179
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 10..44
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 112..137
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 479 AA; 52247 MW; 7710BCA95023545C CRC64;
MSDPRGGGAD PNPDGDDPHD LRLAEEANGD EARHTSDKEA APVSEETAAR GGDTTPDAEP
ESDDGEGGVG SPDQAEPNAD GERAAPAAVA EEREGIVGGA KVETNGEDAI SHDADGEEDE
DDDGDEEDDD DDDDSTPDAS PRAEVKVEGE SSTGMAQSGA SHRAEPEPDP FLDGDDSGTE
EEQAAFMAEL ERFHREHSLE FKPPKFYGKG LNCLKLWRQV AHLGGHEQVT ICKLWRQVGE
TFRPPKTCTT VSWSFRIFYE KALLEYEKYK VRTGQLQIPP PGLPQPSGTD REVVVNQSSS
ARVRRDAATR AMQGWHAHRL LANGTYGDNI LKDKDSMPLS SRDKNLKGFG VLKRKKASSP
EYALKSSRTK VNKSQEDSMV IDVGEPADWV KINVRQTKDC FEVYALVPGL LREEVHVQSD
PAGRLVITGD PEQPDNPWGI TPFKKVVNLP SRIDPHQTSA VVTLHGQLFV RAPFGHADM
//