ID K3YZJ7_SETIT Unreviewed; 708 AA.
AC K3YZJ7;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 24-JAN-2024, entry version 54.
DE RecName: Full=USP domain-containing protein {ECO:0000259|PROSITE:PS50235};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQL31030, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EnsemblPlants:KQL31030, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL31030,
RC ECO:0000313|Proteomes:UP000004995};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EnsemblPlants:KQL31030}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL31030};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SIMILARITY: Belongs to the peptidase C19 family.
CC {ECO:0000256|ARBA:ARBA00009085}.
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DR EMBL; AGNK02000506; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; K3YZJ7; -.
DR STRING; 4555.K3YZJ7; -.
DR EnsemblPlants; KQL31030; KQL31030; SETIT_019706mg.
DR Gramene; KQL31030; KQL31030; SETIT_019706mg.
DR eggNOG; KOG1865; Eukaryota.
DR HOGENOM; CLU_032601_0_0_1; -.
DR InParanoid; K3YZJ7; -.
DR OMA; TSQCKTS; -.
DR Proteomes; UP000004995; Chromosome I.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0004843; F:cysteine-type deubiquitinase activity; IBA:GO_Central.
DR Gene3D; 3.90.70.10; Cysteine proteinases; 1.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR001394; Peptidase_C19_UCH.
DR InterPro; IPR018200; USP_CS.
DR InterPro; IPR028889; USP_dom.
DR PANTHER; PTHR24006; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; 1.
DR PANTHER; PTHR24006:SF747; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 20; 1.
DR Pfam; PF00443; UCH; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
DR PROSITE; PS00973; USP_2; 1.
DR PROSITE; PS50235; USP_3; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000004995}.
FT DOMAIN 171..453
FT /note="USP"
FT /evidence="ECO:0000259|PROSITE:PS50235"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 81..104
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 131..160
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 491..510
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 516..559
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 630..659
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 677..708
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 516..533
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 537..554
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 689..708
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 708 AA; 78924 MW; 26C1255216BCD411 CRC64;
MAEQDGAAGQ SPLDSPPGVS AENGDENTEQ HQPFFSMCQP IRSVSYANSW ESCFAPAANE
NDHNSGLNSM VDDHILITSA SLGSKQPQPE DISGTVDDEG KPCSPHSIDK EASLVQDVME
MEQSMDEIDV PHGEASEQPE PLSTEQPDST GGMDLWDDKD NQKLLPLNTD RWNSNIGETC
DAEDKQFPLS FSYRRQPQSV MIKMDSVLSV PLKNMSMNQF EELSSDFRPG QQEDAHEFLR
CLLDNLHKCT LDPMSKGKGS SFDEESIVKD IFGGQLKSQL SCCECGHSSE TFEPFLDLSL
EIDQVDHLVD AMESFTKVEQ IGDSEDKLTC ERCNAQVCKN KQLTLHRAPD VIAFHLKRFT
TLDNSVEKID KHVVYPSEVD LKPFHSNPDT VGELKYDLYG VVEHSGLPNY GHYVCSIRSS
PSTWYLMNDS HVDSITDASA LNKEAYILFY VRQGKFPWFS SLLEVKDALH AEDARGASPV
SVLENIDANC STSSGGGSSS NSGDKLEKNE ARQLEELEKD ETSQYKVSFC HEEPSKRSSL
GASNINNTRD EISPPRASLQ DDVVRCPRSV ETTNLDRPST PLPSKRSFSH NEFGVFEFED
FEFQPQFIVQ LMFLLVSFTD DDEDTPLLPD LKFHPKAKKP KAASASKAVK GPSIDQNARR
LMSGMPSSRR KGLLDCMVTQ QNAHQESRSR RCPTSDPLDK KKRKLVQC
//
