ID K3Z6S2_SETIT Unreviewed; 399 AA.
AC K3Z6S2;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE RecName: Full=RNA-polymerase II-associated protein 3-like C-terminal domain-containing protein {ECO:0000259|Pfam:PF13877};
GN Name=101754831 {ECO:0000313|EnsemblPlants:KQL13208};
GN ORFNames=SETIT_3G050600v2 {ECO:0000313|EMBL:RCV15355.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EMBL:RCV15355.1};
RN [1] {ECO:0000313|EMBL:RCV15355.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL13208,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV15355.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV15355.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV15355.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQL13208}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL13208};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AGNK02001437; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003530; RCV15353.1; -; Genomic_DNA.
DR EMBL; CM003530; RCV15354.1; -; Genomic_DNA.
DR EMBL; CM003530; RCV15355.1; -; Genomic_DNA.
DR RefSeq; XP_004960386.1; XM_004960329.2.
DR AlphaFoldDB; K3Z6S2; -.
DR STRING; 4555.K3Z6S2; -.
DR EnsemblPlants; KQL13208; KQL13208; SETIT_022241mg.
DR EnsemblPlants; KQL13210; KQL13210; SETIT_022241mg.
DR GeneID; 101754831; -.
DR Gramene; KQL13208; KQL13208; SETIT_022241mg.
DR Gramene; KQL13210; KQL13210; SETIT_022241mg.
DR KEGG; sita:101754831; -.
DR eggNOG; KOG4648; Eukaryota.
DR InParanoid; K3Z6S2; -.
DR OMA; IAMCLTS; -.
DR OrthoDB; 2294768at2759; -.
DR Proteomes; UP000004995; Chromosome III.
DR GO; GO:0009536; C:plastid; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR025986; RPAP3-like_C.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR001440; TPR_1.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR47329; OS05G0129900 PROTEIN; 1.
DR PANTHER; PTHR47329:SF1; OS05G0129900 PROTEIN; 1.
DR Pfam; PF13877; RPAP3_C; 1.
DR Pfam; PF00515; TPR_1; 1.
DR Pfam; PF13181; TPR_8; 1.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 1.
PE 4: Predicted;
KW Plastid {ECO:0000256|ARBA:ARBA00022640};
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}.
FT REPEAT 38..71
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT DOMAIN 267..355
FT /note="RNA-polymerase II-associated protein 3-like C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF13877"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 161..200
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 181..195
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 399 AA; 43957 MW; 1024C053AC07FCC4 CRC64;
MEYTARSNGT SGTSAGSFGG PYNMKYSSYL NDEPMPDAAS EKEQGNEYFK QKKFTEAIEC
YSRSIGLSPT AVAFANRAMA YLKLRRFKEA EDDCTEALNL DDRYIKAYSR RITARKELGK
LKEAMDDAEF AISLEPNNPE LRKQYTEIKA LHMEKLGKKT PVPTKHAVSG LDKPADKKDI
TSHTPTISQK GSFMEVDSPT RAAVEIRESP GGSSSSKGGS GVIVNENVLQ QSRNANQKPG
PEASIQELAS RAASRYMAST VKSVKIPKTA YDFEVSWRAL SDDTAQQIQL LKSIPPASLP
EIFKNALSAP FLIDIVKCSA SIFWDDAALA VSILENLAKV PRFDLIIMCL SSMHKSELRK
IWDQVFLAGK ASADQVEALR QLRSKYIQGG CQDNAFSSS
//
