ID K4A1X5_SETIT Unreviewed; 594 AA.
AC K4A1X5;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN Name=101786923 {ECO:0000313|EnsemblPlants:KQL22432};
GN ORFNames=SETIT_2G031700v2 {ECO:0000313|EMBL:RCV09471.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQL22432, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EMBL:RCV09471.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL22432,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV09471.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV09471.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV09471.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQL22432}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL22432};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; AGNK02000667; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003529; RCV09471.1; -; Genomic_DNA.
DR RefSeq; XP_004958944.1; XM_004958887.2.
DR AlphaFoldDB; K4A1X5; -.
DR EnsemblPlants; KQL22432; KQL22432; SETIT_032871mg.
DR GeneID; 101786923; -.
DR Gramene; KQL22432; KQL22432; SETIT_032871mg.
DR KEGG; sita:101786923; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_37_6_1; -.
DR InParanoid; K4A1X5; -.
DR OMA; EPKHCGD; -.
DR OrthoDB; 1208472at2759; -.
DR Proteomes; UP000004995; Chromosome II.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR24015:SF1832; OS03G0241800 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 185..219
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 255..285
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 287..321
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 502..594
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 594 AA; 65823 MW; 56288968D45C2B46 CRC64;
MLEAAGGRTP STHPALRHCV ALLRLHLATP SLAAAKQLHA RALRAGVPPS HPLLAKHLLF
HLAALRAPPL RYAVAVLTRI LPDPDPFSLN TVLRIAASSP RPRLALALHA RRLAPPDTHT
YPPLLQACAR ILSLRDGERI HAEAAKNGLD TLVFVKNSLV HFYGACGLFE SAHRVFDEIP
VRERNLVSWN SMLNGFAANG RPNEVLTVFR EMMDVDFAPD GFTMVSVLTA CAEIGALALG
RRVHVYLAKV GLVGNSHVGN ALIDLYAKCG GVDDARRVFE EMGAGRTVVS WTSLIVGLAV
NGFGKEALEL FSVMEREKLV PTEITMVGVL YACSHCGLVD DGFMYFDRMK EEYGITPRIE
HLGCMVDLLG RAGKVEEAYD YIVTMPLEPN AVVWRTLLGA CAMHKKLELG EAAWARLIEL
DPGHSGDYVL LSNLYAAVGR WADVHVLRKT MVKDGVRKNP GRSLVELRNS VYEFVMGDRS
HPESEQIYKM LSQIAERLRR EGHVPHTSNV LADIEDEEKE TALNYHSERL AIAFALLKSL
PGTPIRIVKN LRVCGDCHMA IKLISKIYDR EIIVRDRSRF HHFKGGSCSC KDYW
//
