ID K4A7J2_SETIT Unreviewed; 583 AA.
AC K4A7J2;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RCV45954.1, ECO:0000313|EnsemblPlants:KQK92002};
GN Name=101786589 {ECO:0000313|EnsemblPlants:KQK92002};
GN ORFNames=SETIT_9G494400v2 {ECO:0000313|EMBL:RCV45954.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EMBL:RCV45954.1};
RN [1] {ECO:0000313|EMBL:RCV45954.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQK92002,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV45954.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV45954.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV45954.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK92002}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQK92002};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; AGNK02006085; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003536; RCV45954.1; -; Genomic_DNA.
DR RefSeq; XP_004985231.1; XM_004985174.1.
DR AlphaFoldDB; K4A7J2; -.
DR EnsemblPlants; KQK92002; KQK92002; SETIT_034848mg.
DR GeneID; 101786589; -.
DR Gramene; KQK92002; KQK92002; SETIT_034848mg.
DR KEGG; sita:101786589; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_10_2_1; -.
DR InParanoid; K4A7J2; -.
DR OMA; ARIHPWS; -.
DR OrthoDB; 345625at2759; -.
DR Proteomes; UP000004995; Chromosome IX.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR47939; MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE; 1.
DR PANTHER; PTHR47939:SF1; OS04G0684500 PROTEIN; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 2.
DR Pfam; PF13812; PPR_3; 2.
DR PROSITE; PS51375; PPR; 8.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 151..185
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 258..292
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 293..327
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 328..362
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 363..397
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 434..468
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 469..503
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 534..568
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 1..40
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 86..132
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..17
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 24..40
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 583 AA; 64219 MW; 3FCF6518B09DA89B CRC64;
MATVWSGCST SSAFGQELPP RGSRGDRCGT RFRPRSRGRI SGDARQVQAL SPAMVTAGAC
ICRAAPCLLE SEVGGKEDAG VAILGVDGEP HGADGHDGGK RRGLRRRPMR QPAVGEKAGV
GAGSAPPATT AELDMKSEHG GSRLHFLEER NEETLSRRLI KLCQSNKVRS ATELFDSMRA
SGLQPSAHAC NSLLACFVRR SSLADAMRMF EFMKGKRMAT GHTYTLILKA VASNGGYVSA
LEMFNEIEEE EDSKKNVDVI VYNTMISVCG RAKDWMLVER LWRRLEENSL SGTLLTYDLL
VSIFVQCGQC ELAIAAYQEM LQNGLDPSED IMKAIIASCT KEGKWDFALA TFSRMLSAGM
TPNIILFNST INALGKAGQD ELAFRMYHLL TSSGFKPDQY TWSALLSALY KSGRCWDVLE
LFQGIKAKHP TLLNDHLYNI ALMSCERLGQ WEHGLQLLWM MEKSGLKVSV VSYNHVIGAC
EVASKPKVAL QVYRRMINQR CLPDTFTHLS VIRACIWGSL WNEVEDILEE VDPDSSVYNT
VIHGLCLRGK IGLANKVYAK MRGIGLVPDG KTRAFMLQHI ATD
//
