ID K4ABL6_SETIT Unreviewed; 367 AA.
AC K4ABL6;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE RecName: Full=GATA-type domain-containing protein {ECO:0000259|PROSITE:PS50114};
GN Name=101753923 {ECO:0000313|EnsemblPlants:KQK89954};
GN ORFNames=SETIT_9G325200v2 {ECO:0000313|EMBL:RCV43830.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQK89954, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EMBL:RCV43830.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQK89954,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV43830.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV43830.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV43830.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK89954}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQK89954};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SIMILARITY: Belongs to the type IV zinc-finger family. Class A
CC subfamily. {ECO:0000256|ARBA:ARBA00005694}.
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DR EMBL; AGNK02005852; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003536; RCV43830.1; -; Genomic_DNA.
DR RefSeq; XP_004983678.1; XM_004983621.1.
DR AlphaFoldDB; K4ABL6; -.
DR STRING; 4555.K4ABL6; -.
DR EnsemblPlants; KQK89954; KQK89954; SETIT_036273mg.
DR GeneID; 101753923; -.
DR Gramene; KQK89954; KQK89954; SETIT_036273mg.
DR KEGG; sita:101753923; -.
DR eggNOG; KOG1601; Eukaryota.
DR HOGENOM; CLU_045755_5_0_1; -.
DR InParanoid; K4ABL6; -.
DR OMA; RGKKHGP; -.
DR OrthoDB; 3616433at2759; -.
DR Proteomes; UP000004995; Chromosome IX.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0030154; P:cell differentiation; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00202; ZnF_GATA; 1.
DR Gene3D; 3.30.50.10; Erythroid Transcription Factor GATA-1, subunit A; 1.
DR InterPro; IPR000679; Znf_GATA.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR PANTHER; PTHR45658; GATA TRANSCRIPTION FACTOR; 1.
DR PANTHER; PTHR45658:SF46; GATA TRANSCRIPTION FACTOR 2; 1.
DR Pfam; PF00320; GATA; 1.
DR SMART; SM00401; ZnF_GATA; 1.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
DR PROSITE; PS00344; GATA_ZN_FINGER_1; 1.
DR PROSITE; PS50114; GATA_ZN_FINGER_2; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00094};
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00094};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00094}.
FT DOMAIN 260..292
FT /note="GATA-type"
FT /evidence="ECO:0000259|PROSITE:PS50114"
FT REGION 89..110
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 162..253
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 205..232
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 367 AA; 37852 MW; 6B325FF56419C07A CRC64;
MASEWEMAMG VELGMGMGTY HGHHNASSIT TAPMSSHHSG GASYSTAHHH HYYGMPPMGD
AMRVDELLDL STGAGAHDFF PTAAGAAAAD NGHHSGAMGE PSPTANSSDH QTSLLSFADE
FYIPSEEAAE LEWLSKFVDD SYSDMPNYSS HAAMAAAAAA NAAGNGGGNS GGQDSCVTAA
PGRGARSKRS RATAAAAAAW HSLVPRPPSQ SSPSSSCSSS DFPSSNKPGR PNGANGSRGK
KSPGPGGAAG AEVGMEGGVR RCTHCASEKT PQWRTGPLGP KTLCNACGVR FKSGRLMPEY
RPAASPTFVL TQHSNSHRKV MELRRQKELI LIRGSHRDAA AAAAAASAAA GSAGPRPELM
FRDYGVC
//
