ID   K5VTW9_PHACS            Unreviewed;       126 AA.
AC   K5VTW9;
DT   09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT   09-JAN-2013, sequence version 1.
DT   27-MAR-2024, entry version 37.
DE   RecName: Full=RNA polymerase Rpb4/RPC9 core domain-containing protein {ECO:0000259|SMART:SM00657};
GN   ORFNames=PHACADRAFT_105721 {ECO:0000313|EMBL:EKM50014.1};
OS   Phanerochaete carnosa (strain HHB-10118-sp) (White-rot fungus) (Peniophora
OS   carnosa).
OC   Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC   Polyporales; Phanerochaetaceae; Phanerochaete.
OX   NCBI_TaxID=650164 {ECO:0000313|EMBL:EKM50014.1, ECO:0000313|Proteomes:UP000008370};
RN   [1] {ECO:0000313|EMBL:EKM50014.1, ECO:0000313|Proteomes:UP000008370}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HHB-10118-sp {ECO:0000313|EMBL:EKM50014.1,
RC   ECO:0000313|Proteomes:UP000008370};
RX   PubMed=22937793; DOI=10.1186/1471-2164-13-444;
RA   Suzuki H., MacDonald J., Syed K., Salamov A., Hori C., Aerts A.,
RA   Henrissat B., Wiebenga A., vanKuyk P.A., Barry K., Lindquist E.,
RA   LaButti K., Lapidus A., Lucas S., Coutinho P., Gong Y., Samejima M.,
RA   Mahadevan R., Abou-Zaid M., de Vries R.P., Igarashi K., Yadav J.S.,
RA   Grigoriev I.V., Master E.R.;
RT   "Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P.
RT   chrysosporium, to elucidate the genetic basis of the distinct wood types
RT   they colonize.";
RL   BMC Genomics 13:444-444(2012).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the eukaryotic RPB4 RNA polymerase subunit
CC       family. {ECO:0000256|ARBA:ARBA00025724}.
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DR   EMBL; JH930479; EKM50014.1; -; Genomic_DNA.
DR   RefSeq; XP_007401210.1; XM_007401148.1.
DR   AlphaFoldDB; K5VTW9; -.
DR   STRING; 650164.K5VTW9; -.
DR   GeneID; 18907365; -.
DR   KEGG; pco:PHACADRAFT_105721; -.
DR   HOGENOM; CLU_110332_2_0_1; -.
DR   InParanoid; K5VTW9; -.
DR   OrthoDB; 5477031at2759; -.
DR   Proteomes; UP000008370; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0030880; C:RNA polymerase complex; IEA:InterPro.
DR   GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   GO; GO:0006366; P:transcription by RNA polymerase II; IEA:UniProt.
DR   Gene3D; 1.20.1250.40; -; 1.
DR   InterPro; IPR010997; HRDC-like_sf.
DR   InterPro; IPR006590; RNA_pol_Rpb4/RPC9_core.
DR   InterPro; IPR045222; Rpb4-like.
DR   InterPro; IPR005574; Rpb4/RPC9.
DR   InterPro; IPR038324; Rpb4/RPC9_sf.
DR   PANTHER; PTHR21297; DNA-DIRECTED RNA POLYMERASE II; 1.
DR   PANTHER; PTHR21297:SF0; DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4; 1.
DR   Pfam; PF03874; RNA_pol_Rpb4; 1.
DR   SMART; SM00657; RPOL4c; 1.
DR   SUPFAM; SSF47819; HRDC-like; 1.
PE   3: Inferred from homology;
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008370}.
FT   DOMAIN          31..124
FT                   /note="RNA polymerase Rpb4/RPC9 core"
FT                   /evidence="ECO:0000259|SMART:SM00657"
SQ   SEQUENCE   126 AA;  13980 MW;  C38CD593C92C22B5 CRC64;
     MSTPRLRHRP QVEDEDAAAL KLGSGMANLA SEFNNAGCLL ISEVKYLLEN RDKEPPDTAV
     YNKTLEYVKT FGKFNTTDAA SAVRETLRRE PALTQFETAQ IANLCPADSE ESKSIIPRCV
     DPWPHG
//