ID K5YYR2_9PROT Unreviewed; 589 AA.
AC K5YYR2;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN ORFNames=MXAZACID_08095 {ECO:0000313|EMBL:EKM99907.1};
OS Acidocella sp. MX-AZ02.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales;
OC Acetobacteraceae; Acidocella.
OX NCBI_TaxID=1214225 {ECO:0000313|EMBL:EKM99907.1, ECO:0000313|Proteomes:UP000006217};
RN [1] {ECO:0000313|EMBL:EKM99907.1, ECO:0000313|Proteomes:UP000006217}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MX-AZ02 {ECO:0000313|EMBL:EKM99907.1,
RC ECO:0000313|Proteomes:UP000006217};
RX PubMed=23405365;
RA Servin-Garciduenas L.E., Garrett R.A., Amils R., Martinez-Romero E.;
RT "Genome Sequence of the Acidophilic Bacterium Acidocella sp. Strain MX-
RT AZ02.";
RL Genome Announc. 1:E00041-12(2013).
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EKM99907.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AMPS01000112; EKM99907.1; -; Genomic_DNA.
DR RefSeq; WP_008493757.1; NZ_JH976207.1.
DR AlphaFoldDB; K5YYR2; -.
DR STRING; 1214225.MXAZACID_08095; -.
DR PATRIC; fig|1214225.3.peg.1573; -.
DR HOGENOM; CLU_009736_5_1_5; -.
DR Proteomes; UP000006217; Unassembled WGS sequence.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR InterPro; IPR004610; RecJ.
DR InterPro; IPR041122; RecJ_OB.
DR NCBIfam; TIGR00644; recJ; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02272; DHHA1; 1.
DR Pfam; PF17768; RecJ_OB; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:EKM99907.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:EKM99907.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000006217}.
FT DOMAIN 93..248
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 336..452
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
FT DOMAIN 475..585
FT /note="RecJ OB"
FT /evidence="ECO:0000259|Pfam:PF17768"
SQ SEQUENCE 589 AA; 61388 MW; 1DE986A23F7E1F09 CRC64;
MDAHVFGITQ SLSGKSWIWR PGQAERQGEG LAQQLGIPEL MGRLLASRGV TVDHAPTFLD
PTLRAMLPDP SSLIDMDVAA GRLADAVLKV EMVGVFGDYD VDGACSAALM VTLLRQLGCA
VTYHVPDRLT EGYGPNSDAL RAMVERGASL IVCVDCGTAA HAAFAPLHNA ADIIVLDHHK
SEGPPPPVCA TVNPNRLDCP SELRHICAAA VAFLSAVALL RTLRRRGFFA DRAEPDLREM
LDLVALATIC DVMPLSGLNR AFVVQGLKVM ARRARPGLAA LLEVAKLNEA PTAMHCGFAL
GPRINASGRI AEADMGLRLL LAEDTELATE LAQALDAVNK QRQTVEAGVT SDAMSRAEAQ
VAGGHGIILL AQEGWHPGVV GIVAGRVKER FNRPALVAGI ADGIAKGSGR SVPGIDLGAA
VIAARQSGIL ATGGGHAMAA GFSAPETALS TFHGFLNDRL ASAALLPPSA ELLLDGVLGL
AGADAALAQM VARLGPFGTG NEEPLFVLPR ARVVKTDRIG KDGNTIRVML EGEGGGRMKA
LLFRAKDGPL AEALSRVGGA PLHLAGHLRA ESWQGRVSAG FFITDAAPA
//
