ID K6TWI1_9CLOT Unreviewed; 989 AA.
AC K6TWI1;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKQ51342.1};
GN ORFNames=A370_04953 {ECO:0000313|EMBL:EKQ51342.1};
OS Clostridium sp. Maddingley MBC34-26.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=1196322 {ECO:0000313|EMBL:EKQ51342.1, ECO:0000313|Proteomes:UP000001325};
RN [1] {ECO:0000313|EMBL:EKQ51342.1, ECO:0000313|Proteomes:UP000001325}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Maddingley MBC34-26 {ECO:0000313|Proteomes:UP000001325};
RX PubMed=23405323;
RA Rosewarne C.P., Greenfield P., Li D., Tran-Dinh N., Bradbury M.I.,
RA Midgley D.J., Hendry P.;
RT "Draft Genome Sequence of Clostridium sp. Maddingley, Isolated from Coal-
RT Seam Gas Formation Water.";
RL Genome Announc. 1:E00081-12(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EKQ51342.1}.
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DR EMBL; ALXI01000161; EKQ51342.1; -; Genomic_DNA.
DR AlphaFoldDB; K6TWI1; -.
DR STRING; 1196322.A370_04953; -.
DR PATRIC; fig|1196322.3.peg.4817; -.
DR eggNOG; COG5001; Bacteria.
DR Proteomes; UP000001325; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd18773; PDC1_HK_sensor; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR PANTHER; PTHR33121; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR PANTHER; PTHR33121:SF78; CYCLIC DI-GMP PHOSPHODIESTERASE PDEI-RELATED; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
PE 4: Predicted;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000001325};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 14..39
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 374..392
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 589..724
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 733..980
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 989 AA; 114046 MW; 8CAE9CFC243632CA CRC64;
MSFIKNRNSI IKKLLIPMII IMIVQVFLYL SAISFSGIIE ILRDNSFNIL NQKIESRKNY
LQNEMLQHWS NVGESESVIN KAILSKLENR GLTVKDLKNN PKLSTELLND ISSDIIFMLR
KNYVTGAFII LDNDSEEKTG LYFRDLDPNS NPNDNSDLLM ERGPASIAQK LGIPLDTWWN
NKFIFNPNNE VLASPNEFFT KPLDAAKGNK DLSYKDLGYW SKPFSLSEKD IKVITYSVPL
IDNNNQPYGV MGIALSLKYL NTLLNYEEID PNGNGVYLLG ANSNNDLNFE KMMSTGPMVN
KILGEEQDIR LNNKEVYNSI YEIKEPESNK IAYACTKYLN LYNSNTPFEN EKWALIGIVE
KDNLLYYSTR FKNLLIVSLI ISSVIGIMLV IITGGRITRP IRNLAKDVRT SNPREPLELR
KINISEIDEL SSAIMALSTN VADSASKLSQ IIKLFNMPIG AFEYKKGEST VLCTETFLEV
VGIEEPNKFD KYIDIKSFEK IIDGITMNKE LRVDDTYWIE GKNGKPKWIK LKMLQEDSRT
FGVISDVSQE ILEKQKIEYE RDYDILTNIL NRRAFYNNVK EKIKNDDLKI GAFIMWDLDN
LKYVNDTYGH DYGDEYIRKA SNQLKKFEEY GGIIGRRSGD EFYTFLYGYE NKKEIRRIIK
EVHKNIENSI LKLPNNREIK IRISTGIAWY PDDATTFEEL AKYSDFAMYK IKRTVKGNIS
EFNKDEYSED SFLLSSQEDL NKLLDEELIE YAFQPIIDAR NGSIFAYEAL MRSQLESLRS
PLHIIKLATA DFRLYEIERI TFFKALEGFL KNIEKFKEAK LFINSIPNQA LSNEDCEKFE
QLYGEHLDRL VIELLENERS NGEFITKKRK SIEKWNAKLA IDDFGSGYNN EAVLLAITPD
FVKIDMGIVR GIDKDINRQI ISKNLISYAK QRGIKVVAEG VETSEELEKL IELGVDYLQG
YHFSKPEFIP PEISDDLINE ILKINEKFN
//