ID K6X252_9ACTN Unreviewed; 318 AA.
AC K6X252;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 24-JAN-2024, entry version 45.
DE SubName: Full=Putative 5'-3' exonuclease {ECO:0000313|EMBL:GAB98447.1};
GN ORFNames=GONAM_01_00270 {ECO:0000313|EMBL:GAB98447.1};
OS Gordonia namibiensis NBRC 108229.
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Gordoniaceae;
OC Gordonia.
OX NCBI_TaxID=1208314 {ECO:0000313|EMBL:GAB98447.1, ECO:0000313|Proteomes:UP000035058};
RN [1] {ECO:0000313|EMBL:GAB98447.1, ECO:0000313|Proteomes:UP000035058}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 108229 {ECO:0000313|EMBL:GAB98447.1,
RC ECO:0000313|Proteomes:UP000035058};
RA Isaki-Nakamura S., Hosoyama A., Tsuchikane K., Katsumata H., Baba S.,
RA Yamazaki S., Fujita N.;
RT "Whole genome shotgun sequence of Gordonia namibiensis NBRC 108229.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAB98447.1}.
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DR EMBL; BAHE01000001; GAB98447.1; -; Genomic_DNA.
DR RefSeq; WP_006864729.1; NZ_BAHE01000001.1.
DR AlphaFoldDB; K6X252; -.
DR Proteomes; UP000035058; Unassembled WGS sequence.
DR GO; GO:0017108; F:5'-flap endonuclease activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0033567; P:DNA replication, Okazaki fragment processing; IEA:InterPro.
DR CDD; cd09898; H3TH_53EXO; 1.
DR CDD; cd09859; PIN_53EXO; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR InterPro; IPR020046; 5-3_exonucl_a-hlix_arch_N.
DR InterPro; IPR002421; 5-3_exonuclease.
DR InterPro; IPR036279; 5-3_exonuclease_C_sf.
DR InterPro; IPR020045; DNA_polI_H3TH.
DR InterPro; IPR038969; FEN.
DR InterPro; IPR008918; HhH2.
DR InterPro; IPR029060; PIN-like_dom_sf.
DR PANTHER; PTHR42646:SF2; DNA-DIRECTED DNA POLYMERASE; 1.
DR PANTHER; PTHR42646; FLAP ENDONUCLEASE XNI; 1.
DR Pfam; PF01367; 5_3_exonuc; 1.
DR Pfam; PF02739; 5_3_exonuc_N; 1.
DR SMART; SM00475; 53EXOc; 1.
DR SMART; SM00279; HhH2; 1.
DR SUPFAM; SSF47807; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR SUPFAM; SSF88723; PIN domain-like; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Exonuclease {ECO:0000313|EMBL:GAB98447.1};
KW Hydrolase {ECO:0000313|EMBL:GAB98447.1};
KW Nuclease {ECO:0000313|EMBL:GAB98447.1}.
FT DOMAIN 1..284
FT /note="5'-3' exonuclease"
FT /evidence="ECO:0000259|SMART:SM00475"
SQ SEQUENCE 318 AA; 33626 MW; 2C0E0DC30FBEE546 CRC64;
MLLDGASLWF RSFYALPEKM TSPDGRPVNA VRGFIDTIAN LVTREHPTRL VVCLDLDWRP
EFRTALIPTY KAHRVAVEDG ATDATGTETI DVEEVPDTLT PQVDMIMNVL AAAGIATSGA
VGCEADDVIG TLAWEEAKDP VIVVSGDRDL LQVVSDDPVP VRVLYVGRGL AKAEMMGPVE
VGEKYGVPAD RAGIGYAEMS MLRGDPSDGL PGVQGIGEKT AAKLISEYGS LDALEEAARD
SSSKVPTRAR KALLAAADYL EAARTVVSVR TDAETIDSGP DLLPSEPADP EALAALVEEL
GIGASVSRLS KALGWPKA
//
