ID K7BI39_PANTR Unreviewed; 788 AA.
AC K7BI39; H2QAM2;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE SubName: Full=Pyridoxal-dependent decarboxylase domain containing 1 {ECO:0000313|EMBL:JAA29926.1};
GN Name=PDXDC1 {ECO:0000313|EMBL:JAA29926.1,
GN ECO:0000313|Ensembl:ENSPTRP00000013301.4};
OS Pan troglodytes (Chimpanzee).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Pan.
OX NCBI_TaxID=9598 {ECO:0000313|EMBL:JAA29926.1};
RN [1] {ECO:0000313|Ensembl:ENSPTRP00000013301.4, ECO:0000313|Proteomes:UP000002277}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16136131; DOI=10.1038/nature04072;
RG Chimpanzee sequencing and analysis consortium;
RT "Initial sequence of the chimpanzee genome and comparison with the human
RT genome.";
RL Nature 437:69-87(2005).
RN [2] {ECO:0000313|EMBL:JAA29926.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Adipose stromal {ECO:0000313|EMBL:JAA11281.1}, Skin
RC {ECO:0000313|EMBL:JAA29926.1}, and Smooth vascular
RC {ECO:0000313|EMBL:JAA19227.1};
RA Maudhoo M.D., Meehan D.T., Norgren R.B.Jr.;
RT "De novo assembly of the reference chimpanzee transcriptome from NextGen
RT mRNA sequences.";
RL Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Ensembl:ENSPTRP00000013301.4}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000256|ARBA:ARBA00001933};
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DR EMBL; AC193033; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; GABC01000057; JAA11281.1; -; mRNA.
DR EMBL; GABF01002918; JAA19227.1; -; mRNA.
DR EMBL; GABD01003174; JAA29926.1; -; mRNA.
DR RefSeq; XP_016784957.1; XM_016929468.1.
DR PaxDb; 9598-ENSPTRP00000013301; -.
DR Ensembl; ENSPTRT00000014352.4; ENSPTRP00000013301.4; ENSPTRG00000007799.5.
DR GeneID; 453941; -.
DR CTD; 23042; -.
DR eggNOG; KOG0630; Eukaryota.
DR GeneTree; ENSGT00390000009628; -.
DR OrthoDB; 3142408at2759; -.
DR TreeFam; TF313101; -.
DR Proteomes; UP000002277; Chromosome 16.
DR Bgee; ENSPTRG00000007799; Expressed in testis and 21 other cell types or tissues.
DR GO; GO:0016830; F:carbon-carbon lyase activity; IEA:InterPro.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR GO; GO:0019752; P:carboxylic acid metabolic process; IEA:InterPro.
DR Gene3D; 3.90.1150.170; -; 1.
DR Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR InterPro; IPR002129; PyrdxlP-dep_de-COase.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR PANTHER; PTHR42735; -; 1.
DR PANTHER; PTHR42735:SF1; PYRIDOXAL-DEPENDENT DECARBOXYLASE DOMAIN-CONTAINING PROTEIN 1-RELATED; 1.
DR Pfam; PF00282; Pyridoxal_deC; 1.
DR SUPFAM; SSF53383; PLP-dependent transferases; 1.
PE 2: Evidence at transcript level;
KW Lyase {ECO:0000256|ARBA:ARBA00023239};
KW Reference proteome {ECO:0000313|Proteomes:UP000002277}.
FT REGION 684..788
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 741..766
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 769..788
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 788 AA; 86703 MW; 7DE7C28BCD2AECC6 CRC64;
MDASLEKIAD PTLAEMGKNL KEAVKMLEDS QTRTEEENGK KLVSGDIPGP LQGSGQDMVS
ILQLVQNLMH GDEDEEPQSP RIQNIGEQGH MALLGHSLGA YISTLDKEKL RKLTTRILSD
TTLWLCRIFR YENGCAYFHE EEREGLAKIC RLAIHSRYED FVVDGFNVLY NKKPVIYLSA
AARPGLGQYL CNQLGLPFPC LCRVPCNTMF GSQHQMDVAF LEKLIKDDIE RGRLPLLLVA
NAGTAAVGHT DKIGRLKELC EQYGIWLHVE GVNLATLALG YVSSSVLAAA KCDSMTMTPG
PWLGLPAVPA VTLYKHDDPA LTLVAGLTSN KPTDKLRALP LWLSLQYLGL DGFVERIKHA
CQLSQRLQES LKKVNYIKIL VEDELSSPVV VFRFFQELPG SDPVFKAVPV PNMTPSAVGR
ERHSCDALNR WLGEQLKQLV PAGGLTVMDL EAEGTCLRFS PLMTAAVLGT RGEDVDQLVA
CIESKLPVLC CTLQLREEFK QEVEATAGLL YVDDPNWPGI GVVRYEHAND DKSSLKSDPE
GEKIHAGLLK KLNELESDLT FKIGPEYKSM KSCLYVGMAS DDVDAAELVE TIVATAREIE
ENSRLLENMT EVVRKGIQEA QVELQKASEE RLLEEGVLRQ IPVVGSVLNW FSPVQALQKG
RTFNLTAGSL ESTEPIYVYK AQGAGVTLPP TPSGSRTKQR LPGQKPFKRS LRGSDALSET
SSVSHIEDLE KVERLSGGLE QITLEASSTE GHPGAPSPQH TDQTEAFQKG VPHPEDDHPQ
VEGPESLR
//