ID K7F702_PELSI Unreviewed; 484 AA.
AC K7F702;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE RecName: Full=HTH CENPB-type domain-containing protein {ECO:0000259|PROSITE:PS51253};
OS Pelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia;
OC Trionychidae; Pelodiscus.
OX NCBI_TaxID=13735 {ECO:0000313|Ensembl:ENSPSIP00000003812.1, ECO:0000313|Proteomes:UP000007267};
RN [1] {ECO:0000313|Proteomes:UP000007267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Daiwa-1 {ECO:0000313|Proteomes:UP000007267};
RG Soft-shell Turtle Genome Consortium;
RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000007267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Daiwa-1 {ECO:0000313|Proteomes:UP000007267};
RX PubMed=23624526; DOI=10.1038/ng.2615;
RA Wang Z., Pascual-Anaya J., Zadissa A., Li W., Niimura Y., Huang Z., Li C.,
RA White S., Xiong Z., Fang D., Wang B., Ming Y., Chen Y., Zheng Y.,
RA Kuraku S., Pignatelli M., Herrero J., Beal K., Nozawa M., Li Q., Wang J.,
RA Zhang H., Yu L., Shigenobu S., Wang J., Liu J., Flicek P., Searle S.,
RA Wang J., Kuratani S., Yin Y., Aken B., Zhang G., Irie N.;
RT "The draft genomes of soft-shell turtle and green sea turtle yield insights
RT into the development and evolution of the turtle-specific body plan.";
RL Nat. Genet. 45:701-706(2013).
RN [3] {ECO:0000313|Ensembl:ENSPSIP00000003812.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; AGCU01039497; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; K7F702; -.
DR Ensembl; ENSPSIT00000003832.1; ENSPSIP00000003812.1; ENSPSIG00000003612.1.
DR eggNOG; KOG3105; Eukaryota.
DR GeneTree; ENSGT00940000162277; -.
DR HOGENOM; CLU_018294_1_1_1; -.
DR OMA; CHKANTE; -.
DR TreeFam; TF101131; -.
DR Proteomes; UP000007267; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR004875; DDE_SF_endonuclease_dom.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR006600; HTH_CenpB_DNA-bd_dom.
DR InterPro; IPR007889; HTH_Psq.
DR PANTHER; PTHR19303:SF11; JERKY PROTEIN HOMOLOG; 1.
DR PANTHER; PTHR19303; TRANSPOSON; 1.
DR Pfam; PF04218; CENP-B_N; 1.
DR Pfam; PF03184; DDE_1; 1.
DR Pfam; PF03221; HTH_Tnp_Tc5; 1.
DR SMART; SM00674; CENPB; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS51253; HTH_CENPB; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007267}.
FT DOMAIN 56..128
FT /note="HTH CENPB-type"
FT /evidence="ECO:0000259|PROSITE:PS51253"
FT REGION 431..451
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 431..450
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 484 AA; 55238 MW; 4FB8A8FA58BEC661 CRC64;
LSKKLDIIRH LEKGVNRKVL TDEYSVGSST LYDIKAQKDK LLTSVVQSET KKGLEKCHTL
HKLKLEQLDK ALNEWFALKR SEGHPISGPM LIEKAKDFYK QMELTEPCAF SEGWLQCFKL
QHGIRRLHVS GEKASADHEA AESYYESFKK LVSEDELSAD QIYHADESYW PTSTLADEGE
FSASGFKQNN DRLTVLTCAN ASGYHRIKFV IGKYVKPTSL KGVIHLSVEY KAQYNAWMDC
DIFSNIPSHL ENLRKLNKPE DSKVILLLDN YRVHPSETDL VSGNIFTVFL PPNVTSLIQP
MDNLQETLHA TVDPVSRQHQ GISISVHKDV IFSVACAWNT VKSQTLRRSW RKLWLNSIFA
EGSSDEEENF EGFSVTRRKT EFTDIIEVLK QAEPKNPLKN LKEDEVEEQV YMDNNADVTY
SPSDTEIREK VLNPEKSLPP EYDSEEDKTS WANASSDLST LIKFAERHSS FSSQEVIQLY
AQET
//
