ID K7FK39_PELSI Unreviewed; 591 AA.
AC K7FK39;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE SubName: Full=Lamin-L(III)-like {ECO:0000313|Ensembl:ENSPSIP00000008399.1};
OS Pelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia;
OC Trionychidae; Pelodiscus.
OX NCBI_TaxID=13735 {ECO:0000313|Ensembl:ENSPSIP00000008399.1, ECO:0000313|Proteomes:UP000007267};
RN [1] {ECO:0000313|Proteomes:UP000007267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Daiwa-1 {ECO:0000313|Proteomes:UP000007267};
RG Soft-shell Turtle Genome Consortium;
RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000007267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Daiwa-1 {ECO:0000313|Proteomes:UP000007267};
RX PubMed=23624526; DOI=10.1038/ng.2615;
RA Wang Z., Pascual-Anaya J., Zadissa A., Li W., Niimura Y., Huang Z., Li C.,
RA White S., Xiong Z., Fang D., Wang B., Ming Y., Chen Y., Zheng Y.,
RA Kuraku S., Pignatelli M., Herrero J., Beal K., Nozawa M., Li Q., Wang J.,
RA Zhang H., Yu L., Shigenobu S., Wang J., Liu J., Flicek P., Searle S.,
RA Wang J., Kuratani S., Yin Y., Aken B., Zhang G., Irie N.;
RT "The draft genomes of soft-shell turtle and green sea turtle yield insights
RT into the development and evolution of the turtle-specific body plan.";
RL Nat. Genet. 45:701-706(2013).
RN [3] {ECO:0000313|Ensembl:ENSPSIP00000008399.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the intermediate filament family.
CC {ECO:0000256|RuleBase:RU000685}.
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DR EMBL; AGCU01203265; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_014437135.1; XM_014581649.1.
DR RefSeq; XP_014437136.1; XM_014581650.1.
DR RefSeq; XP_014437137.1; XM_014581651.1.
DR AlphaFoldDB; K7FK39; -.
DR STRING; 13735.ENSPSIP00000008399; -.
DR Ensembl; ENSPSIT00000008442.1; ENSPSIP00000008399.1; ENSPSIG00000007569.1.
DR GeneID; 102448632; -.
DR eggNOG; KOG0977; Eukaryota.
DR GeneTree; ENSGT00940000164952; -.
DR HOGENOM; CLU_012560_9_2_1; -.
DR OMA; HKFPRRE; -.
DR OrthoDB; 72418at2759; -.
DR TreeFam; TF101181; -.
DR Proteomes; UP000007267; Unassembled WGS sequence.
DR GO; GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
DR GO; GO:0005635; C:nuclear envelope; IEA:UniProt.
DR Gene3D; 1.20.5.170; -; 1.
DR Gene3D; 2.60.40.1260; Lamin Tail domain; 1.
DR Gene3D; 1.20.5.1160; Vasodilator-stimulated phosphoprotein; 2.
DR InterPro; IPR018039; IF_conserved.
DR InterPro; IPR039008; IF_rod_dom.
DR InterPro; IPR001322; Lamin_tail_dom.
DR InterPro; IPR036415; Lamin_tail_dom_sf.
DR PANTHER; PTHR45721; LAMIN DM0-RELATED; 1.
DR PANTHER; PTHR45721:SF16; LAMIN L3; 1.
DR Pfam; PF00038; Filament; 1.
DR Pfam; PF00932; LTD; 1.
DR SMART; SM01391; Filament; 1.
DR SUPFAM; SSF64593; Intermediate filament protein, coiled coil region; 2.
DR SUPFAM; SSF74853; Lamin A/C globular tail domain; 1.
DR PROSITE; PS00226; IF_ROD_1; 1.
DR PROSITE; PS51842; IF_ROD_2; 1.
DR PROSITE; PS51841; LTD; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Intermediate filament {ECO:0000256|ARBA:ARBA00022754,
KW ECO:0000256|RuleBase:RU000685};
KW Lipoprotein {ECO:0000256|ARBA:ARBA00023289};
KW Methylation {ECO:0000256|ARBA:ARBA00022481};
KW Prenylation {ECO:0000256|ARBA:ARBA00023289};
KW Reference proteome {ECO:0000313|Proteomes:UP000007267}.
FT DOMAIN 35..391
FT /note="IF rod"
FT /evidence="ECO:0000259|PROSITE:PS51842"
FT DOMAIN 434..550
FT /note="LTD"
FT /evidence="ECO:0000259|PROSITE:PS51841"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 551..576
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 32..73
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 124..214
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 289..362
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 591 AA; 67454 MW; E7621509646FE04E CRC64;
MAAAVSSTPA GSGRALRRSA ALSPLSPTRL SRLQEKEELQ QLNDRLAAYI DRVRALEADK
SALQLRLAEQ EEGSSRELGN LRLRYETELA DARKALDGIA IERATLQVEL GKLSEEHRQL
HARNTKKEAD LNLAQARVRD LDAQLNSKEA DLATALSGKR SLEGDLQELK DQIVTLKLAL
EDTKKHLHSE MLKRVDLENQ MKTLQEQMTF QKRLHEDELK ETKRFHESRI AEIESGRQRE
FESKLSDVLQ GLRKEHEDQI QEYKDGLERT FSAKIENAQL SAAKNSDFAN AAREELMETK
MRVDSLTSQL NHYQNQNSAL ENRLRELQET LDYDRDLHRR HMAEKDKEMA QTRRQMQAQL
EEYEHLLDVK LALDLEINAY RKMLEGEEQR LKLPSSPSSQ SVAIQATTSH GRRFLHGKKR
KLKESQKGEH SVSFKTVQHV SCSGNVSIEE IDTEGKFVKL KNNLDEDQSL NGCVLRRRLG
SLSEIIYRFP ARFVLQGGQV VTIWGADAGV NQSPSDLVWK SQKSWGTGDN ISVTLINADG
EETAERKIIR VPREESGGER EDECDEEEIT GSETELRRRT KRRKKKCCLV S
//
