ID K7G3H1_PELSI Unreviewed; 617 AA.
AC K7G3H1;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE SubName: Full=Actin binding LIM protein 1 {ECO:0000313|Ensembl:ENSPSIP00000014832.1};
GN Name=ABLIM1 {ECO:0000313|Ensembl:ENSPSIP00000014832.1};
OS Pelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia;
OC Trionychidae; Pelodiscus.
OX NCBI_TaxID=13735 {ECO:0000313|Ensembl:ENSPSIP00000014832.1, ECO:0000313|Proteomes:UP000007267};
RN [1] {ECO:0000313|Proteomes:UP000007267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Daiwa-1 {ECO:0000313|Proteomes:UP000007267};
RG Soft-shell Turtle Genome Consortium;
RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000007267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Daiwa-1 {ECO:0000313|Proteomes:UP000007267};
RX PubMed=23624526; DOI=10.1038/ng.2615;
RA Wang Z., Pascual-Anaya J., Zadissa A., Li W., Niimura Y., Huang Z., Li C.,
RA White S., Xiong Z., Fang D., Wang B., Ming Y., Chen Y., Zheng Y.,
RA Kuraku S., Pignatelli M., Herrero J., Beal K., Nozawa M., Li Q., Wang J.,
RA Zhang H., Yu L., Shigenobu S., Wang J., Liu J., Flicek P., Searle S.,
RA Wang J., Kuratani S., Yin Y., Aken B., Zhang G., Irie N.;
RT "The draft genomes of soft-shell turtle and green sea turtle yield insights
RT into the development and evolution of the turtle-specific body plan.";
RL Nat. Genet. 45:701-706(2013).
RN [3] {ECO:0000313|Ensembl:ENSPSIP00000014832.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; AGCU01165848; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01165849; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01165850; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01165851; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01165852; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01165853; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01165854; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01165855; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01165856; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01165857; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; K7G3H1; -.
DR STRING; 13735.ENSPSIP00000014832; -.
DR Ensembl; ENSPSIT00000014903.1; ENSPSIP00000014832.1; ENSPSIG00000013278.1.
DR eggNOG; KOG1044; Eukaryota.
DR GeneTree; ENSGT00950000182850; -.
DR HOGENOM; CLU_001357_12_3_1; -.
DR OMA; RDYNERH; -.
DR TreeFam; TF318042; -.
DR Proteomes; UP000007267; Unassembled WGS sequence.
DR GO; GO:0030027; C:lamellipodium; IEA:Ensembl.
DR GO; GO:0001725; C:stress fiber; IEA:Ensembl.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0060271; P:cilium assembly; IEA:Ensembl.
DR GO; GO:0030032; P:lamellipodium assembly; IEA:Ensembl.
DR CDD; cd09327; LIM1_abLIM; 1.
DR CDD; cd09328; LIM2_abLIM; 1.
DR CDD; cd09329; LIM3_abLIM; 1.
DR CDD; cd09330; LIM4_abLIM; 1.
DR Gene3D; 2.10.110.10; Cysteine Rich Protein; 4.
DR InterPro; IPR032402; AbLIM_anchor.
DR InterPro; IPR001781; Znf_LIM.
DR PANTHER; PTHR24213; ACTIN-BINDING LIM PROTEIN; 1.
DR PANTHER; PTHR24213:SF18; ACTIN-BINDING LIM PROTEIN 1; 1.
DR Pfam; PF16182; AbLIM_anchor; 1.
DR Pfam; PF00412; LIM; 4.
DR SMART; SM00132; LIM; 4.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 6.
DR PROSITE; PS00478; LIM_DOMAIN_1; 3.
DR PROSITE; PS50023; LIM_DOMAIN_2; 3.
PE 4: Predicted;
KW LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PROSITE-
KW ProRule:PRU00125}; Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125};
KW Reference proteome {ECO:0000313|Proteomes:UP000007267};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00125}.
FT DOMAIN 20..79
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT DOMAIN 80..139
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT DOMAIN 147..206
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT REGION 262..293
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 333..434
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 477..525
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 548..586
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 274..288
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 368..415
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 508..525
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 617 AA; 68729 MW; C28DCAD0917E1484 CRC64;
MSARVAHSQE PPHSTEKPVI HCHKCGEPCK GEVLRVQSRH FHIKCFICKV CGCDLAQGGF
FIKNGDYLCT VDYQRMYGTR CNSCGEFVEG EVVTALGKTY HPNCFACTVC KRPFPPGDRV
TFNGRDCLCQ MCAQPMSTSP KEISSSSNCA GCGRDIKNGQ ALLALDKQWH LGCFKCKACG
KVLTGEYISK DGSPYCEKDY QVLFGVKCEA CHQFITGKVL EAGDKHYHPS CARCSRCNQM
FTEGEEMYLQ GSTVWHPDCK QSTKAEDKLR PTRTSSESIY SRPGSSIPGS PGHTIYAKVD
NEILDYKDLA AIPKVKAIYD IERPDLITYE PFYTSASEDR QERQSLGESP RTLSPTPSAE
GYQDVRDRMI QRSTSQGSIS SPVYSRHSYT PTMSRSPQHF HRPGNEPSSG RNSPVPYRPD
SRPLTPTYVQ APKHFHVPDQ GINIYRKPPI YKQHDAAALA AQSKSSEDII KSSKFPAAHA
PAPNEIPKIE TDHWPGPPSL AAVGADMRRR SSGREEEDEE LQRRRQLQEE QLMKLNSGLG
QLILKEEMEK ETRDRPPLPA SRYDSPASAS KTSSLPGYGR NGLHRPVSTD FGQYNSYGDV
SSGVRDFQVE YGFSSIN
//
