ID K7GH39_PELSI Unreviewed; 1061 AA.
AC K7GH39;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 65.
DE SubName: Full=PHD finger protein 20 {ECO:0000313|Ensembl:ENSPSIP00000019600.1};
GN Name=PHF20 {ECO:0000313|Ensembl:ENSPSIP00000019600.1};
OS Pelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia;
OC Trionychidae; Pelodiscus.
OX NCBI_TaxID=13735 {ECO:0000313|Ensembl:ENSPSIP00000019600.1, ECO:0000313|Proteomes:UP000007267};
RN [1] {ECO:0000313|Proteomes:UP000007267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Daiwa-1 {ECO:0000313|Proteomes:UP000007267};
RG Soft-shell Turtle Genome Consortium;
RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000007267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Daiwa-1 {ECO:0000313|Proteomes:UP000007267};
RX PubMed=23624526; DOI=10.1038/ng.2615;
RA Wang Z., Pascual-Anaya J., Zadissa A., Li W., Niimura Y., Huang Z., Li C.,
RA White S., Xiong Z., Fang D., Wang B., Ming Y., Chen Y., Zheng Y.,
RA Kuraku S., Pignatelli M., Herrero J., Beal K., Nozawa M., Li Q., Wang J.,
RA Zhang H., Yu L., Shigenobu S., Wang J., Liu J., Flicek P., Searle S.,
RA Wang J., Kuratani S., Yin Y., Aken B., Zhang G., Irie N.;
RT "The draft genomes of soft-shell turtle and green sea turtle yield insights
RT into the development and evolution of the turtle-specific body plan.";
RL Nat. Genet. 45:701-706(2013).
RN [3] {ECO:0000313|Ensembl:ENSPSIP00000019600.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; AGCU01095367; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01095368; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01095369; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01095370; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01095371; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01095372; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01095373; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01095374; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01095375; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_006124493.1; XM_006124431.2.
DR AlphaFoldDB; K7GH39; -.
DR STRING; 13735.ENSPSIP00000019600; -.
DR Ensembl; ENSPSIT00000019691.1; ENSPSIP00000019600.1; ENSPSIG00000017361.1.
DR GeneID; 102453988; -.
DR KEGG; pss:102453988; -.
DR CTD; 51230; -.
DR eggNOG; KOG1844; Eukaryota.
DR GeneTree; ENSGT00940000156477; -.
DR HOGENOM; CLU_012707_0_0_1; -.
DR OMA; IRAIWIK; -.
DR OrthoDB; 5491784at2759; -.
DR TreeFam; TF106475; -.
DR Proteomes; UP000007267; Unassembled WGS sequence.
DR GO; GO:0005829; C:cytosol; IEA:Ensembl.
DR GO; GO:0071339; C:MLL1 complex; IEA:Ensembl.
DR GO; GO:0044545; C:NSL complex; IEA:Ensembl.
DR GO; GO:0031965; C:nuclear membrane; IEA:Ensembl.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0051571; P:positive regulation of histone H3-K4 methylation; IEA:Ensembl.
DR CDD; cd20104; MBT_PHF20L1-like; 1.
DR CDD; cd15634; PHD_PHF20; 1.
DR CDD; cd20453; Tudor_PHF20; 1.
DR Gene3D; 2.30.30.140; -; 2.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR041297; Crb2_Tudor.
DR InterPro; IPR043449; PHF20-like.
DR InterPro; IPR022255; PHF20_AT-hook.
DR InterPro; IPR002999; Tudor.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR15856:SF27; PHD FINGER PROTEIN 20; 1.
DR PANTHER; PTHR15856; PHD FINGER PROTEIN 20-RELATED; 1.
DR Pfam; PF20826; PHD_5; 1.
DR Pfam; PF12618; PHF20_AT-hook; 1.
DR Pfam; PF18115; Tudor_3; 1.
DR SMART; SM00333; TUDOR; 2.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF63748; Tudor/PWWP/MBT; 2.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 4: Predicted;
KW Acetylation {ECO:0000256|ARBA:ARBA00022990};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000007267};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 448..478
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 142..418
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 478..625
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 642..678
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 144..261
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 265..280
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 282..329
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 370..396
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 397..413
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 482..514
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 539..553
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 554..596
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 651..667
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1061 AA; 122442 MW; B0F6EFD402E2819B CRC64;
MTKHPPNRRG INFEVGAQLE ARDRLKNWYP AHIEEIDYEE GKVLIHFKRW NHRYDEWFCW
DSPYLRPLEK IQLRKEGLHE EDGCGGFHIN DQVLACWSDC RFYPAKVTSV NKDGTYTVKF
YDGVIQTVKN IHVKAFSKDQ NIVSNARPKE RVHEIPSSPE KREKFKEQRK ASENTKKGKD
EKALKTEKRS KQPDKEGKII ISEKCKVSEK NIPKNGKEDK ENISENDMEY SVDTQVEKKS
ENESVKSPPE NTKETKRKRG RPPITPPTAQ SSQTLQSITL ELRRRKIPKG GEVPSKRPRI
EKNLSQEKLK NSPDSNERDQ IRRRSSRLSS SGSHEIVNTD LVKKSFVEIG PLKDPTSSPK
EPEEIQLEIP VKSDQNSCEQ ASQSSGDVSS TTPIDENISL KEEKSDDHEL SFAPTESQEP
SVTVIKTFKK TDDFIASKAA AVDQDHKFRC KLLDCSKSFR RAKLLHYHMK YFHGVEKAPE
SQQSPVKRNI QTRGSLASEK VKQGNLNRRR TTSGSLYAPL HIALRSTPHR DEKIGKRRTS
APSSVNTLKA HRPSLREQSQ ENHIGRFHEK HQEGERTENA VKDKEKNKEK KSQDCVRSKS
KKKKKKTQSE YPGSDENIDI SQELSPKKSV ITTRYYSSNK SYPHLSTPLH VSDSGHHRVK
VNEEDTLSES STDSLLWSDD DYSQDIDVTT NPDEELDEED SDFGIVRCIC EVEEENDFMI
QCEECLCWQH GVCMGLLEDN VPEKYTCYIC QDPPGQRSSL KYWYEKEWLS NGHMHGLAFL
EENYSHQNAK KIVATHQLLG DVQKVIEVLH GLQLKMSILQ NKEHPDLKLW CHPWKHLTTD
EKIHTKHIIH IEENCCKEET VSYRTFNGTV EKPSTIPSVE ESYITSEHCY QKPRAYYPAI
EQRLVVETRG LAMDDGVNRI RENGDDVLSE RFGWNLDREL SKLENESKHN YSKVRECVSK
KIPSEEAIEM KLLEKDKDVV MNSQVQWQLN LLAHVESLQD EVTHRMDFIE KELDVLESWL
DYTGELEPPE PLARLPQLKH CIKQLITDLG KVQQIAFCCS T
//
