ID K7KH11_SOYBN Unreviewed; 610 AA.
AC K7KH11;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=SWIM-type domain-containing protein {ECO:0000259|PROSITE:PS50966};
GN Name=100808214 {ECO:0000313|EnsemblPlants:KRH68848};
GN ORFNames=GLYMA_03G254000 {ECO:0000313|EMBL:KRH68845.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH68848};
RN [1] {ECO:0000313|EMBL:KRH68845.1, ECO:0000313|EnsemblPlants:KRH68848}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH68848};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH68845.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH68848}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH68848};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH68845.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH68845.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000836; KRH68845.1; -; Genomic_DNA.
DR EMBL; CM000836; KRH68846.1; -; Genomic_DNA.
DR EMBL; CM000836; KRH68847.1; -; Genomic_DNA.
DR EMBL; CM000836; KRH68848.1; -; Genomic_DNA.
DR RefSeq; XP_003520857.2; XM_003520809.3.
DR RefSeq; XP_006577331.1; XM_006577268.2.
DR RefSeq; XP_006577332.1; XM_006577269.2.
DR AlphaFoldDB; K7KH11; -.
DR PaxDb; 3847-GLYMA03G41472-1; -.
DR EnsemblPlants; KRH68845; KRH68845; GLYMA_03G254000.
DR EnsemblPlants; KRH68846; KRH68846; GLYMA_03G254000.
DR EnsemblPlants; KRH68847; KRH68847; GLYMA_03G254000.
DR EnsemblPlants; KRH68848; KRH68848; GLYMA_03G254000.
DR GeneID; 100808214; -.
DR Gramene; KRH68845; KRH68845; GLYMA_03G254000.
DR Gramene; KRH68846; KRH68846; GLYMA_03G254000.
DR Gramene; KRH68847; KRH68847; GLYMA_03G254000.
DR Gramene; KRH68848; KRH68848; GLYMA_03G254000.
DR KEGG; gmx:100808214; -.
DR eggNOG; ENOG502R0RS; Eukaryota.
DR HOGENOM; CLU_006767_8_2_1; -.
DR InParanoid; K7KH11; -.
DR OMA; LQLTSWF; -.
DR OrthoDB; 444337at2759; -.
DR Proteomes; UP000008827; Chromosome 3.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR InterPro; IPR018289; MULE_transposase_dom.
DR InterPro; IPR004332; Transposase_MuDR.
DR InterPro; IPR006564; Znf_PMZ.
DR InterPro; IPR007527; Znf_SWIM.
DR PANTHER; PTHR31973; POLYPROTEIN, PUTATIVE-RELATED; 1.
DR PANTHER; PTHR31973:SF93; SWIM-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF03108; DBD_Tnp_Mut; 1.
DR Pfam; PF10551; MULE; 1.
DR Pfam; PF04434; SWIM; 1.
DR SMART; SM00575; ZnF_PMZ; 1.
DR PROSITE; PS50966; ZF_SWIM; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00325};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325}.
FT DOMAIN 469..510
FT /note="SWIM-type"
FT /evidence="ECO:0000259|PROSITE:PS50966"
SQ SEQUENCE 610 AA; 69491 MW; FA840A5F016E8B9B CRC64;
MTLIFSCFGG YMANHSLVLD NNTSVSTVTV AEQPLVIGQE FADVETCRRT LKDIAIAMHF
DLRIVKSDRS RFIAKCSKEG CPWRVHVAKC PGVPTFTVRT LHGEHTCEGV QNLHHQQASV
GWVARSVEAR IRDNPQYKPR EILQDIRDQH GVAVSYMQAW RGKERSMAAL HGTFEEGYRL
LPAYCEQIRK TNPGSIASVV ATGQENCFQR LFISYRASIY GFINACRPLL ELDRAHLKGK
YLGTLLCAAA VDADDALFPL AIAVVDSESD ENWMWFMSEL RKLLGVNTDN MPRLTILSER
QRGLVEAVET HFPTASHGFC LRSVSENFRD TFKNTKLVNI FWNAVYALTA AEFESKITEM
MEISQDVISW FQQFPPYLWA VAYFDGVRYG HFTLGVTELL YNWALECHEL PVVQMMEHIR
QQMVSWFNDR QDMGMRWTSI LVPSAEKRIL EAIADAHCYQ VLRANEVEFE IVSTERTNIV
DIRSRECSCR RWQLYGLPCA HAAAALISCG HNAHMFAEPC FTVQSYRMTY SQMINPIPDK
SQWRDLGEGA EGGGGARFDI IICPPKTRRP PGRPKKKVIR VENFKRPKRV VQCGRCHMLG
HSQKKCTMPI
//
