ID K7KNP4_SOYBN Unreviewed; 1954 AA.
AC K7KNP4;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 74.
DE RecName: Full=BIG2 domain-containing protein {ECO:0000259|SMART:SM00635};
GN ORFNames=GLYMA_05G003500 {ECO:0000313|EMBL:KRH56543.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH56543};
RN [1] {ECO:0000313|EMBL:KRH56543.1, ECO:0000313|EnsemblPlants:KRH56543}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH56543};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH56543.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH56543}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH56543};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH56543.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH56543.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the NUP210 family.
CC {ECO:0000256|ARBA:ARBA00007313}.
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DR EMBL; CM000838; KRH56543.1; -; Genomic_DNA.
DR AlphaFoldDB; K7KNP4; -.
DR SMR; K7KNP4; -.
DR STRING; 3847.K7KNP4; -.
DR PaxDb; 3847-GLYMA05G09015-1; -.
DR EnsemblPlants; KRH56543; KRH56543; GLYMA_05G003500.
DR Gramene; KRH56543; KRH56543; GLYMA_05G003500.
DR eggNOG; KOG1833; Eukaryota.
DR HOGENOM; CLU_001205_1_1_1; -.
DR InParanoid; K7KNP4; -.
DR OMA; GFYYCDI; -.
DR OrthoDB; 356078at2759; -.
DR Proteomes; UP000008827; Chromosome 5.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.1080; -; 1.
DR InterPro; IPR003343; Big_2.
DR InterPro; IPR008964; Invasin/intimin_cell_adhesion.
DR InterPro; IPR045197; NUP210-like.
DR PANTHER; PTHR23019:SF0; NUCLEAR PORE MEMBRANE GLYCOPROTEIN 210; 1.
DR PANTHER; PTHR23019; NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATED; 1.
DR Pfam; PF02368; Big_2; 2.
DR SMART; SM00635; BID_2; 3.
DR SUPFAM; SSF49373; Invasin/intimin cell-adhesion fragments; 1.
PE 3: Inferred from homology;
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..26
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 27..1954
FT /note="BIG2 domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5014580791"
FT TRANSMEM 1858..1881
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 478..554
FT /note="BIG2"
FT /evidence="ECO:0000259|SMART:SM00635"
FT DOMAIN 1147..1223
FT /note="BIG2"
FT /evidence="ECO:0000259|SMART:SM00635"
FT DOMAIN 1557..1632
FT /note="BIG2"
FT /evidence="ECO:0000259|SMART:SM00635"
FT REGION 1887..1927
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1887..1923
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1954 AA; 213900 MW; 0CE3A09175D56A63 CRC64;
MNDLIRGKMV NMALLLSFLV TATVLASSSH AASSGPHIAD VNILLPPKMT FPVDYRLQGS
DGCFQWSWDH HDILSVEPEY NSSSKCSTSA RIRSIAPYSG RKETAVYAAD LQTGIVIRCK
VFIDNISRIQ IFHNSIKLDL EGLATLRVRA FDSEENVFSS LVGLQFMWSL MPEANGLPCH
LVNVPLKDSP LSDCGGLCGN LDIQIKLEDN GVFSDLFVVK GIEIGHEIVS VHLLEPQLKN
LADEIVLTVA EAMSLDPPSP VFVLVGAVIP YTLKVIRGNV PQVVTLPSAH HQWSVSNASV
AQVDSKTGLA YAWNLGMAAV IVEDTRIAGH VQVSSLNVVL PASLCLYISP LSSSGDPVEG
IKSIALTTRW YVVSGHQYLI QIKVFAHDHD AQEIYITEND DVKVYDNDSG HWKTFWVSND
IAVKHGWRNS KILKAYSPGL EKLTASLSYP GGADDKKEII KAVQEVMVCD RVKYTLGNES
GIILLPWSPG VYQEVELKAI GGCAKTVSDY KWLSSDLSTV SVSAFGVVQA KKPGKATIKV
LSVYDSLNYD EVLVEVSIPS SMVMLHNFPV ETVVGSHLQA AVTMKAANGA FFYRCDAFNS
LIKWKAGSES FVIVNATQEL LYLETVPNTQ FQSSVDGSPC SWTYVYASNP GQAVIHAIFS
KEDHHYSLGP GVLKASSRIV AYLPLIVRQA GDGNQFGGYW LDLVQAESNK QSHSLEELYL
VPGTSLDIVL VGGPEWWDNG VDFIETVEVL DEGNALAEDG VLVHRVSSNL YGVLCQKLGS
FKLLFRRGNL VGDDHPLPSV AEVWLSVTCN IPSSIVLIAD EPVNERRIIK AAAQAERSSG
RLRDTPVIVA NGRSIRVSAV GISDSGEAYA NSSSLSLRWE LGSCEGLAYW DYAFDIVKSN
SWERFLVLQN ESGLCTVRAT VTDFADSLGD DTFHRFTKTE NVLTDAIRLQ LVSTLRVDPE
FNLIYFNPNA KVNLSIIGGS CFLEAVTNDS QVVEVIQPPS GLECLQLILS PKGLGTANLT
IYDIGLTPPQ RASALVQVAD IEWIKIISGA EISLMEGSLQ TIDLLAGTNG GNNFHASQFV
YMNLHVHVED SIIELVDTED FSSLVGGHVN APSFKIKGRH LGITTLYVSA IQHLGHVIQS
QAIKVEVYAA PRIHPHDIFL LPGASYVLTM EGGPTLGVHV EYEIDNDKIA SIDRYSGRLL
ASSIGNTTII ASVFANGNTV ICEARSFLRV GVPSTVTLHV QSEQLGIGRK LPIYPLFPEG
TLSSFYELCK NYQWSIEDEK VLSFKVAETL HEDSIQLTAS AGSQVNSYFD DNDLGFINVL
YGRSAGKTNV AVSFSCELST SGSRTQSRFY SSSLSVTVIP DLPLALGVPI TWILPPYYTM
TSPLPSSSES HSQNDSRNRR GTISYSLLRS LEKNEALQKD AIFIDADRIK TTKSNNLACI
QAKDRTTGRT EIASCVKVAE VTQIRIASKE VLLNIINLAV GAELDLPTSF YDALGNPFHE
AYNAVPFYAE TNYPDVLCVN KTADGKGNVH IKAIQHGKAL VRVAISEDLQ KSDYVLIRVG
AHIYPQNPVL HIGSPLNLSI KGLSDTISGQ WFTTNGSVIS VDTLSGMAKA IGEGSAQVSF
HYGRLRLQTT ITVLKGNYIF VNAPKETLTN VPYPSKGYNF SVKFSESLGA PGEKKRILFN
CRVDPLFVGY VKPWLDQDSG NSYCLFFPYS PEHLVHSVPK LEGMRPDVSL SISASLEHEH
VSGSASALFI GGFSIMEMSK NSMQLNLTPG SNKTCITVLG NTDVEIHWHH RDLIMISLIH
KEDFGIRGFA RYEVKLLKAK RFKDRIIITL PANGQSVEID INHEPEETAS SSVTINKAFW
ASILGYLLLL ILSIAIITRF LDRPERSQQT SSSVTTTPSI AAPTTPDRST PSSVVNDSSP
RTPQPFVDYV RKTIDETPYY KREGRRRINP QNTF
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