ID K7LJ06_SOYBN Unreviewed; 735 AA.
AC K7LJ06;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN Name=100789823 {ECO:0000313|EnsemblPlants:KRH33465};
GN ORFNames=GLYMA_10G124600 {ECO:0000313|EMBL:KRH33465.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH33465};
RN [1] {ECO:0000313|EMBL:KRH33465.1, ECO:0000313|EnsemblPlants:KRH33465}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH33465};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH33465.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH33465}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH33465};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH33465.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH33465.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000843; KRH33465.1; -; Genomic_DNA.
DR EMBL; CM000843; KRH33466.1; -; Genomic_DNA.
DR EMBL; CM000843; KRH33467.1; -; Genomic_DNA.
DR EMBL; CM000843; KRH33468.1; -; Genomic_DNA.
DR RefSeq; XP_003535221.1; XM_003535173.3.
DR AlphaFoldDB; K7LJ06; -.
DR SMR; K7LJ06; -.
DR PaxDb; 3847-GLYMA10G24581-2; -.
DR EnsemblPlants; KRH33465; KRH33465; GLYMA_10G124600.
DR EnsemblPlants; KRH33466; KRH33466; GLYMA_10G124600.
DR EnsemblPlants; KRH33467; KRH33467; GLYMA_10G124600.
DR EnsemblPlants; KRH33468; KRH33468; GLYMA_10G124600.
DR GeneID; 100789823; -.
DR Gramene; KRH33465; KRH33465; GLYMA_10G124600.
DR Gramene; KRH33466; KRH33466; GLYMA_10G124600.
DR Gramene; KRH33467; KRH33467; GLYMA_10G124600.
DR Gramene; KRH33468; KRH33468; GLYMA_10G124600.
DR KEGG; gmx:100789823; -.
DR eggNOG; KOG0800; Eukaryota.
DR HOGENOM; CLU_029228_0_0_1; -.
DR InParanoid; K7LJ06; -.
DR OMA; DNFEETC; -.
DR OrthoDB; 1212613at2759; -.
DR Proteomes; UP000008827; Chromosome 10.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IBA:GO_Central.
DR GO; GO:0006511; P:ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR CDD; cd16454; RING-H2_PA-TM-RING; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45931:SF12; OS04G0511600 PROTEIN; 1.
DR PANTHER; PTHR45931; SI:CH211-59O9.10; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 690..731
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 30..50
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 76..152
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 177..215
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 232..259
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 298..327
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 355..500
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 562..608
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 101..137
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 179..202
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 355..405
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 423..439
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 478..500
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 573..601
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 735 AA; 81705 MW; 72EB8021EB60B6B1 CRC64;
MTEDMKIDHI VEVPDTPDRT TVRHDYQKYL GNPDKRGRAF NAADENNNHS NYISLSPSEE
SYSSQNAPIF RRAQTDGAEK MEKGKSISSK VPSKSSHRGI SILDLTEENE QIRHPKPAFS
HRGSRDNATE DKKALKATNG RSSLPVISDS SNTSRNAFIG KYKLDIKTLP GPNISVDHGK
GISLSNDSQL QNEKQVSLPP RVSTSPRGRG HKRLVRNGCI SPHNIATMEK QLAEQSNHKT
KDVEQSHGHS VSSSTVSPVS VDDIVAGERG NGRGKGKEVL AYRSPHRLTF RTASSPVTNY
EEINGPSNAI RNPLQYSGGQ GGRRTTHNER NANWHLHDVN GHHLRINNDV GRFINGHNTT
GMDRRNTGNG QSSNHIHGSQ SDHTAQPTSV IIPDVDQSSG THRTADILTK RQRKRESPSG
FMFRGSTGDS SSSSRNPVSD PEVIELLSPP RGSSSSSRTS VLDHEVVDLL STPRYANRSS
EDLDDNDNNS SEARARQVEA DERLARELQE QLYHDDPFEG RGIDEDLAWD LQRAEALMRA
TIDSHSISQP RQLPRAIRQP RTRFPENPSR RRAMAQASFS NRMSQWRSRA TSRTRAPSTS
SRGRGPRFPL DMDLDMRLDI LEALEDSVGD FSDMGITDGI FNARRDFTDA DYEMLLALDE
GNHQHTGASS NLINSLPQST IQTDNFTDAC AICLETPVQG EIIRHLPCLH KFHKDCIDPW
LQRKTSCPVC KSSIT
//