ID K7LKA7_SOYBN Unreviewed; 471 AA.
AC K7LKA7;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 24-JAN-2024, entry version 68.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN Name=100811267 {ECO:0000313|EnsemblPlants:KRH34534};
GN ORFNames=GLYMA_10G189500 {ECO:0000313|EMBL:KRH34536.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH34536.1};
RN [1] {ECO:0000313|EMBL:KRH34536.1, ECO:0000313|EnsemblPlants:KRH34534}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH34534};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH34536.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH34534}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH34534};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH34536.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH34536.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000843; KRH34534.1; -; Genomic_DNA.
DR EMBL; CM000843; KRH34535.1; -; Genomic_DNA.
DR EMBL; CM000843; KRH34536.1; -; Genomic_DNA.
DR RefSeq; XP_003536257.1; XM_003536209.3.
DR AlphaFoldDB; K7LKA7; -.
DR SMR; K7LKA7; -.
DR STRING; 3847.K7LKA7; -.
DR PaxDb; 3847-GLYMA10G33320-3; -.
DR EnsemblPlants; KRH34534; KRH34534; GLYMA_10G189500.
DR EnsemblPlants; KRH34535; KRH34535; GLYMA_10G189500.
DR EnsemblPlants; KRH34536; KRH34536; GLYMA_10G189500.
DR GeneID; 100811267; -.
DR Gramene; KRH34534; KRH34534; GLYMA_10G189500.
DR Gramene; KRH34535; KRH34535; GLYMA_10G189500.
DR Gramene; KRH34536; KRH34536; GLYMA_10G189500.
DR KEGG; gmx:100811267; -.
DR eggNOG; KOG4205; Eukaryota.
DR HOGENOM; CLU_012062_1_2_1; -.
DR InParanoid; K7LKA7; -.
DR OMA; WGNNRQN; -.
DR OrthoDB; 5491699at2759; -.
DR Proteomes; UP000008827; Chromosome 10.
DR ExpressionAtlas; K7LKA7; baseline and differential.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12325; RRM1_hnRNPA_hnRNPD_like; 1.
DR CDD; cd12330; RRM2_Hrp1p; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR48035; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1; 1.
DR PANTHER; PTHR48035:SF2; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1; 1.
DR Pfam; PF00076; RRM_1; 2.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 6..82
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 112..189
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 84..107
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 390..471
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 390..413
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 428..450
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 471 AA; 47553 MW; 1744FD4F1039584D CRC64;
MDSDQGKLFI GGISWDTTED KLKEHFGNYG DVLSTSVMRE KNTGKPRGFG FVVFADPNIL
DRVLEDKHVI DGRTVDAKKA FSREDQQISV TSRGGNSNSG MNSGNGGNIR TKKIFVGGLP
PTLTEEKFRQ YFESYGNVTD VVVMYDQNTG RPRGFGFISF DTEDAVDRVL HKSFHDLNGK
QVEVKRALPK DANPGASGRM MGGAGGGGYQ GYGASGGNQN AYDGRMDSSR YMQPQSAAGG
FPPYGSSAYS APGYGYGPAS NGIGYGAYGS YGGATAGYGG PAAATYGNPN VPNAAYAGGP
PGGPRSTWPA QAPSGYGSMG YGNTAAWGAP SGGAGSGGGG PGSATAGQSP GGAAGYGNQG
YGYGGYGGYG GSDSSYGNSG AYGTVGGRTG SAPNNNASAS GGSELTSSGG SGNYMGGGYG
DANGNSGYGN AAWRSEQTHA SGNYGTPQGN GGQVGYGVGY GGAQSRQAQQ Q
//
