ID K7MQ28_SOYBN Unreviewed; 908 AA.
AC K7MQ28;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 69.
DE RecName: Full=CW-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=GLYMA_18G052100 {ECO:0000313|EMBL:KRG98131.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRG98133};
RN [1] {ECO:0000313|EMBL:KRG98131.1, ECO:0000313|EnsemblPlants:KRG98133}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRG98133};
RC TISSUE=Callus {ECO:0000313|EMBL:KRG98131.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRG98133}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRG98133};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRG98131.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRG98131.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000851; KRG98131.1; -; Genomic_DNA.
DR EMBL; CM000851; KRG98132.1; -; Genomic_DNA.
DR EMBL; CM000851; KRG98133.1; -; Genomic_DNA.
DR AlphaFoldDB; K7MQ28; -.
DR SMR; K7MQ28; -.
DR EnsemblPlants; KRG98131; KRG98131; GLYMA_18G052100.
DR EnsemblPlants; KRG98132; KRG98132; GLYMA_18G052100.
DR EnsemblPlants; KRG98133; KRG98133; GLYMA_18G052100.
DR Gramene; KRG98131; KRG98131; GLYMA_18G052100.
DR Gramene; KRG98132; KRG98132; GLYMA_18G052100.
DR Gramene; KRG98133; KRG98133; GLYMA_18G052100.
DR HOGENOM; CLU_015907_0_0_1; -.
DR OMA; RGKEWIF; -.
DR Proteomes; UP000008827; Chromosome 18.
DR ExpressionAtlas; K7MQ28; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd10017; B3_DNA; 1.
DR Gene3D; 3.30.40.100; -; 1.
DR Gene3D; 2.40.330.10; DNA-binding pseudobarrel domain; 1.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR InterPro; IPR011124; Znf_CW.
DR PANTHER; PTHR46245; B3 DOMAIN-CONTAINING PROTEIN OS07G0563300; 1.
DR PANTHER; PTHR46245:SF3; B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1; 1.
DR Pfam; PF02362; B3; 1.
DR Pfam; PF07496; zf-CW; 1.
DR SMART; SM01019; B3; 1.
DR SUPFAM; SSF101936; DNA-binding pseudobarrel domain; 1.
DR PROSITE; PS50863; B3; 1.
DR PROSITE; PS51050; ZF_CW; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 336..437
FT /note="TF-B3"
FT /evidence="ECO:0000259|PROSITE:PS50863"
FT DOMAIN 597..647
FT /note="CW-type"
FT /evidence="ECO:0000259|PROSITE:PS51050"
FT REGION 241..308
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 438..471
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 750..814
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 853..877
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 279..293
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 753..796
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 800..814
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 853..873
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 908 AA; 100380 MW; 43C2D96923FC9777 CRC64;
MGSNICVVNG SCTHEWRKGW PLRSGGFAQL CCKCGFMEEW KGDILDPLSA YENSVFCNKF
HCQQTGWREC NFCNKPIHCG CIVSRSLFEY LDFGGIGCVS CVNTTQLSMM RNMENPNVTV
LSIKNNAGDR HSAHFDGRLP VGGVDEGKLM QFCKIIEASE SSRWNHAQRD GIIAHRGQKN
QEAKSSFREV EIGFSNVMNP SVQSLTFATL ENNRSTWEIK NMHESNTKPS LSMYLGNASG
NNSVPPSAGE AVEGRLDGKT SPPFQGSRSI FPKPLKNGLT MNMETNKGTM SQSRVARPPA
DGRGKNQLLP RYWPRITDEE LERLAGDLKS TVVPLFEKVL SASDAGRIGR LVLPKACAEA
YFPPISQSEG VPLRMQDVKG NEWTFQFRFW PNNNSRMYVL EGVTPCIQAM QLCAGDTVTF
SRIDPGGKLV MGFRKASNST DTQDASTSAQ SNSAKGTVSS GTENLPSGSN NADLLHSLTG
NVECHLNGHT EHLHLGTGTA GLLKTENNEM TNSSSPQQQI SVLEKKRTRN IGPKSKRLLI
DNEDAMELKL TWEEAQDLLR PPPSVKPSIV TIEDQVIEEY DEPPVFGKRT IFSACSSGGK
EQWAQCDDCS KWRKLPVDAL LPPKWTCCEN VWDSSRCSCS APEELSSREI ENLLKNNKDF
KKRRIVESSK SIQEHEPSGL DALASAAVLG ENLIDTAESS AGVTTKHPRH RPGCSCIVCI
QPPSGKGRHK PTCTCNVCMT VKRRFKTLML RKKKRQSERE ADAAQKDQTL PKDELDTNGA
SRDDTSQLEK EAGLKSQHEV GGSSAGQIDL NSHPNREDMQ VETTGLNMSS HLEPATNHTV
GEFMNQNGLR NFNNEVQTGQ NSSLHTPKSN GEGQRYFSDG RCFASIMWNQ ERKDEVHSQT
NQSQNNLS
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