ID K7MX50_SOYBN Unreviewed; 976 AA.
AC K7MX50;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE RecName: Full=ATP-dependent DNA helicase {ECO:0000256|RuleBase:RU363044};
DE EC=3.6.4.12 {ECO:0000256|RuleBase:RU363044};
GN ORFNames=GLYMA_19G075500 {ECO:0000313|EMBL:KRG94315.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRG94315.1};
RN [1] {ECO:0000313|EMBL:KRG94315.1, ECO:0000313|EnsemblPlants:KRG94315}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRG94315};
RC TISSUE=Callus {ECO:0000313|EMBL:KRG94315.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRG94315}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRG94315};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRG94315.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRG94315.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.12;
CC Evidence={ECO:0000256|RuleBase:RU363044};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|RuleBase:RU363044};
CC -!- SIMILARITY: Belongs to the helicase family.
CC {ECO:0000256|RuleBase:RU363044}.
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DR EMBL; CM000852; KRG94315.1; -; Genomic_DNA.
DR AlphaFoldDB; K7MX50; -.
DR SMR; K7MX50; -.
DR PaxDb; 3847-GLYMA19G22433-1; -.
DR EnsemblPlants; KRG94315; KRG94315; GLYMA_19G075500.
DR Gramene; KRG94315; KRG94315; GLYMA_19G075500.
DR eggNOG; KOG0987; Eukaryota.
DR HOGENOM; CLU_001324_0_0_1; -.
DR InParanoid; K7MX50; -.
DR OMA; CECEGIG; -.
DR Proteomes; UP000008827; Chromosome 19.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003678; F:DNA helicase activity; IEA:InterPro.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR GO; GO:0000723; P:telomere maintenance; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR010285; DNA_helicase_pif1-like.
DR InterPro; IPR025476; Helitron_helicase-like.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR049163; Pif1-like_2B_dom.
DR PANTHER; PTHR45786; DNA BINDING PROTEIN-LIKE; 1.
DR PANTHER; PTHR45786:SF66; REPLICATION FACTOR-A CARBOXY-TERMINAL DOMAIN PROTEIN; 1.
DR Pfam; PF14214; Helitron_like_N; 1.
DR Pfam; PF05970; PIF1; 2.
DR Pfam; PF21530; Pif1_2B_dom; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|RuleBase:RU363044};
KW DNA damage {ECO:0000256|RuleBase:RU363044};
KW DNA recombination {ECO:0000256|RuleBase:RU363044};
KW DNA repair {ECO:0000256|RuleBase:RU363044};
KW Helicase {ECO:0000256|RuleBase:RU363044};
KW Hydrolase {ECO:0000256|RuleBase:RU363044};
KW Nucleotide-binding {ECO:0000256|RuleBase:RU363044};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 91..273
FT /note="Helitron helicase-like"
FT /evidence="ECO:0000259|Pfam:PF14214"
FT DOMAIN 863..896
FT /note="DNA helicase Pif1-like 2B"
FT /evidence="ECO:0000259|Pfam:PF21530"
SQ SEQUENCE 976 AA; 112477 MW; 7307BBC88DA5BFDA CRC64;
MLDKHNAHAK SFRMARDRLA NSDVDNVILR MISTREKDGR TYNVPTVSCD FNPNSRRDII
LETENGQLQR IHELHSSYLG LQFPLLFPYE WFAYRLQCRP NEAQTLLHSR RLFQQFIVEA
YTMVESERLN YIRNNQKKLR VDKYCSLQNS LDAGTNQGLN KGKRVILPST FVGSPHYMDQ
LYFDGMAICS HVGFPNLFIT LTCNPNWPEI HRLLAPLNLK PSDRPYIISR VFKLKYEEML
SDLKKSHLLG KEVAYMQTIE FQKRGLPHVH LLLFLHPDNK YPTSDEIDQI ISAEIPSRED
DPELYKLVQN HMVHGPCGII HFEYPCMKEG KCSRFYPEMF QPRTLLDPNG YPIYRRRNDG
HTISKNGVII DNRHIVPYNP KLLKKYQAHV NIEWCNQSTS IKYLFKYINK GYDRVTVVML
YDDNDEIQNA TNQKDEIKEY IDYRIFSFPI HARKPAIERL YFHLPGQHNV LYEDHDGIGD
VLSKPSISDS KFLAWMNANK FFSEGRNLTY SEFISKLIWV PPTTGELFYL RIMLTACKGA
TSFEDIRTAT NIQYLTYREA CFVMGVLQDD REFIEAIKEA KDWGTTNYLR KLFVLMLLTG
AINKPEEVWN QTWHWLADDI AYHYSKSTIN TDEQTSIYKQ IIEVVNKNQG GMFFLYGSGG
TGKTFIWRTL ATSLRANNQI VIKVASSGIT SLLLPGSRTA HSKFKIPVPI FEDSTCNIHQ
GTPMAHKFCF EVLDQSLRDI IKTKPSSNQI FGGKVIVFGG GFQQILPVIP RGSRLDIVNT
TINSSYLQDF CQNNEQSPNE QEIAAFAKWI LDNGDGIIGH QNDGYSTIEI PEDLLITQYD
DPIHAIVNST FPDLTQHHND GHLPNHCIKL KIGTPIMLLR NLDQTQGLCN DTRLITRRLA
KHVIAAEIIS SKYSGHMVYI PRMSMSPSQS PWPFKLLRRQ FPIMLSYAMT INKSQGQSLS
TVELYSPKPV FSHGQL
//
