ID K7MXD6_SOYBN Unreviewed; 723 AA.
AC K7MXD6;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=GLYMA_19G088500 {ECO:0000313|EMBL:KRG94491.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRG94491.1};
RN [1] {ECO:0000313|EMBL:KRG94491.1, ECO:0000313|EnsemblPlants:KRG94491}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRG94491};
RC TISSUE=Callus {ECO:0000313|EMBL:KRG94491.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRG94491}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRG94491};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRG94491.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRG94491.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM000852; KRG94491.1; -; Genomic_DNA.
DR AlphaFoldDB; K7MXD6; -.
DR SMR; K7MXD6; -.
DR STRING; 3847.K7MXD6; -.
DR PaxDb; 3847-GLYMA19G25280-2; -.
DR EnsemblPlants; KRG94491; KRG94491; GLYMA_19G088500.
DR Gramene; KRG94491; KRG94491; GLYMA_19G088500.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_12_1; -.
DR InParanoid; K7MXD6; -.
DR OMA; WDESKSH; -.
DR Proteomes; UP000008827; Chromosome 19.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47938:SF7; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47938; RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 7.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 263..297
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 323..357
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 358..392
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 496..530
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 531..565
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 566..600
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 601..635
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 723 AA; 82401 MW; 29511AD7DE45B26E CRC64;
MREGGMVDRG KVGKQKKIKL THLRQQQLLH FHVYLIRVRP RSLNIPKPSP IFTCPLTWVT
SATTSLRLGC PPPPHPTLSS LPSILTIKTL DSSKCKSILS HLTPHHFDRL FLSLHHTTNP
KTTHEFFHFS TRHCNFCFTV RSYCLLLRSL LASSFVPRAR FLLACLIDDN VPTSTSLSFR
DNESRLREIA SSMLELDQGS DQQQRIGLAA PRIFPCLKTY NFLLSFLVKA NELHKSYEVF
SGGRVGDAVD LFCKMEGIGV SPNVVAYNNV IDGLCKGGRL EEALKFKDRM IRSKVNPSVC
DMEKFKEANK VLVEMYSMGQ TPNEVDFNVL IDGYCRKRDM DRALRVRDEM AMKGRKPNVV
TFNTLLQGFC RSNQMELAEQ VLGYILSSRL SMNMDVCSYV IHRLLESSGF DLALKIVTKL
VLRNIKVSDS LLTQLVGGLC KCERHSEAIE LWFKLAAGKG LATNTVTLNA LLHGLWNMEE
VFKVLKQMLE KGLLLDRISY NTLIFGCCKW AKIEVAFKHK KEMVQQEFQP DTYTYNFLMK
GLADMGKINY VHRLLYEAKE YGMVPNVYTY ALLLEGYCKA DRIEDAVKLF KKLDYEKVEL
NFVVYNILIA AYCRIGNVME AFKLRDATKS GGILPTCATY SSLILGMCCI GSRELLNEMV
RNEIAPDTIT YNTLQKGYCK ERELQVTLQS DHMSNTRLTL GEEITYNTLV HRLHRHTTIS
NKE
//
