ID K7MZD8_SOYBN Unreviewed; 324 AA.
AC K7MZD8;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483};
DE EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};
GN Name=100781704 {ECO:0000313|EnsemblPlants:KRG96321};
GN ORFNames=GLYMA_19G203000 {ECO:0000313|EMBL:KRG96321.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRG96321.1};
RN [1] {ECO:0000313|EMBL:KRG96321.1, ECO:0000313|EnsemblPlants:KRG96321}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRG96321};
RC TISSUE=Callus {ECO:0000313|EMBL:KRG96321.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRG96321}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRG96321};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRG96321.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRG96321.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine +
CC [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-
CC cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.;
CC EC=2.3.2.27; Evidence={ECO:0000256|ARBA:ARBA00000900};
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
CC -!- SIMILARITY: Belongs to the RING-type zinc finger family.
CC {ECO:0000256|ARBA:ARBA00038033}.
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DR EMBL; CM000852; KRG96321.1; -; Genomic_DNA.
DR EMBL; CM000852; KRG96322.1; -; Genomic_DNA.
DR RefSeq; XP_003554494.1; XM_003554446.3.
DR RefSeq; XP_006604677.1; XM_006604614.2.
DR AlphaFoldDB; K7MZD8; -.
DR SMR; K7MZD8; -.
DR STRING; 3847.K7MZD8; -.
DR PaxDb; 3847-GLYMA19G39040-2; -.
DR EnsemblPlants; KRG96321; KRG96321; GLYMA_19G203000.
DR EnsemblPlants; KRG96322; KRG96322; GLYMA_19G203000.
DR GeneID; 100781704; -.
DR Gramene; KRG96321; KRG96321; GLYMA_19G203000.
DR Gramene; KRG96322; KRG96322; GLYMA_19G203000.
DR KEGG; gmx:100781704; -.
DR eggNOG; ENOG502QQHB; Eukaryota.
DR InParanoid; K7MZD8; -.
DR OMA; LCQCQSC; -.
DR OrthoDB; 901818at2759; -.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000008827; Chromosome 19.
DR ExpressionAtlas; K7MZD8; baseline and differential.
DR GO; GO:0016746; F:acyltransferase activity; IEA:UniProt.
DR GO; GO:0140096; F:catalytic activity, acting on a protein; IEA:UniProt.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR CDD; cd23127; RING-HC_BAH1-like; 1.
DR CDD; cd14482; SPX_BAH1-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR033326; BAH1.
DR InterPro; IPR004331; SPX_dom.
DR InterPro; IPR027370; Znf-RING_euk.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR46764; E3 UBIQUITIN-PROTEIN LIGASE BAH1; 1.
DR PANTHER; PTHR46764:SF2; E3 UBIQUITIN-PROTEIN LIGASE BAH1-LIKE-RELATED; 1.
DR Pfam; PF13445; zf-RING_UBOX; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51382; SPX; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 1..152
FT /note="SPX"
FT /evidence="ECO:0000259|PROSITE:PS51382"
FT DOMAIN 219..268
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 324 AA; 37154 MW; 4DF77A3DF9CC1CA9 CRC64;
MKFGSAFREY LQEEREWLVD QKCAHVEYIR LKKVLKTCQK DTSSSDNKDQ LCHCQSCPLC
DQQFFSELMK EASDVVGYFS SRVKNLLHLH IATGMQRYVL RLRQCFKDDR QALTQEGRIL
IEYIAMNAIA MRKILKKYDK VHSSVNGENF KSRMHAEHIE ILHSPWLIEL GAFYLNSSGL
DSCDLDGVYG RFSCELNITK AVMTLVLPDS INLEHDLTCA ICLDFVFNPY ALSCGHIFCK
SCACSAASVM IFQGLKAASP ESKCPICREV GVYSKAVHML ELDLLVKRRC KDYWKERLAG
ERGDKLKQSN DYWNLQSTYS IGLM
//
