ID K7NTG2_9CAUD Unreviewed; 750 AA.
AC K7NTG2;
DT 06-FEB-2013, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2013, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE RecName: Full=Ribonucleoside-diphosphate reductase {ECO:0000256|ARBA:ARBA00012274, ECO:0000256|RuleBase:RU003410};
DE EC=1.17.4.1 {ECO:0000256|ARBA:ARBA00012274, ECO:0000256|RuleBase:RU003410};
GN Name=nrdA {ECO:0000313|EMBL:AEX26546.1};
GN ORFNames=KP27_073 {ECO:0000313|EMBL:AEX26546.1};
OS Klebsiella phage KP27.
OC Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes;
OC Straboviridae; Slopekvirus; Slopekvirus kp27.
OX NCBI_TaxID=1129147 {ECO:0000313|EMBL:AEX26546.1, ECO:0000313|Proteomes:UP000010073};
RN [1] {ECO:0000313|Proteomes:UP000010073}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Drulis-Kawa Z., Maciaszczyk-Dziubinska E., Villegas A., Kropinski A.M.;
RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Provides the precursors necessary for DNA synthesis.
CC Catalyzes the biosynthesis of deoxyribonucleotides from the
CC corresponding ribonucleotides. {ECO:0000256|RuleBase:RU003410}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=[thioredoxin]-disulfide + a 2'-deoxyribonucleoside 5'-
CC diphosphate + H2O = [thioredoxin]-dithiol + a ribonucleoside 5'-
CC diphosphate; Xref=Rhea:RHEA:23252, Rhea:RHEA-COMP:10698, Rhea:RHEA-
CC COMP:10700, ChEBI:CHEBI:15377, ChEBI:CHEBI:29950, ChEBI:CHEBI:50058,
CC ChEBI:CHEBI:57930, ChEBI:CHEBI:73316; EC=1.17.4.1;
CC Evidence={ECO:0000256|RuleBase:RU003410};
CC -!- SIMILARITY: Belongs to the ribonucleoside diphosphate reductase large
CC chain family. {ECO:0000256|ARBA:ARBA00010406,
CC ECO:0000256|RuleBase:RU003410}.
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DR EMBL; HQ918180; AEX26546.1; -; Genomic_DNA.
DR RefSeq; YP_007348702.1; NC_020080.1.
DR GeneID; 14516271; -.
DR KEGG; vg:14516271; -.
DR OrthoDB; 2980at10239; -.
DR UniPathway; UPA00326; -.
DR Proteomes; UP000010073; Genome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004748; F:ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor; IEA:UniProtKB-EC.
DR GO; GO:0009263; P:deoxyribonucleotide biosynthetic process; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR Gene3D; 1.10.1650.20; -; 1.
DR Gene3D; 3.20.70.20; -; 1.
DR InterPro; IPR005144; ATP-cone_dom.
DR InterPro; IPR013346; NrdE_NrdA_C.
DR InterPro; IPR000788; RNR_lg_C.
DR InterPro; IPR013509; RNR_lsu_N.
DR InterPro; IPR008926; RNR_R1-su_N.
DR InterPro; IPR039718; Rrm1.
DR NCBIfam; TIGR02506; NrdE_NrdA; 1.
DR PANTHER; PTHR11573; RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN; 1.
DR PANTHER; PTHR11573:SF6; RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE SUBUNIT; 1.
DR Pfam; PF03477; ATP-cone; 1.
DR Pfam; PF02867; Ribonuc_red_lgC; 1.
DR Pfam; PF00317; Ribonuc_red_lgN; 1.
DR PRINTS; PR01183; RIBORDTASEM1.
DR SUPFAM; SSF51998; PFL-like glycyl radical enzymes; 1.
DR SUPFAM; SSF48168; R1 subunit of ribonucleotide reductase, N-terminal domain; 1.
DR PROSITE; PS51161; ATP_CONE; 1.
DR PROSITE; PS00089; RIBORED_LARGE; 1.
PE 3: Inferred from homology;
KW Allosteric enzyme {ECO:0000256|ARBA:ARBA00022533};
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|PROSITE-
KW ProRule:PRU00492};
KW Deoxyribonucleotide synthesis {ECO:0000256|ARBA:ARBA00023116,
KW ECO:0000256|RuleBase:RU003410};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741, ECO:0000256|PROSITE-
KW ProRule:PRU00492};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002,
KW ECO:0000256|RuleBase:RU003410}.
FT DOMAIN 5..94
FT /note="ATP-cone"
FT /evidence="ECO:0000259|PROSITE:PS51161"
SQ SEQUENCE 750 AA; 85100 MW; 7A766955AEF32E95 CRC64;
MNDIKVVVKS SGVRQPFDKE KIYKVLKWAC DGHNIDVRAF LENVLELIRD GMTTKQIQRI
VIKYAADHIS VKEPDWQYVA SNLEMFALRK DVYGQFDPIP FYDHIVKMVE AGKYDKEILE
KYSKQDIQVF ERAIDHDKDF EFSYAGSQQL IGKYLVQDRD TGEIFETPQY AFMLIAMCLH
QEETGLAQVT HIVDFYNAIS DRKLSLPTPI MAGVRTPTRQ FSSCVVIESG DSLGSLNAVT
SAIVKYISQR AGIGVNAGHI RAMGSKIRGG EAVHTGVIPF WKHIQTAVKS CSQGGVRGGA
ATLYYPFWHL EVENLLVLKN NKGVEENRVR HLDYGVQLNQ LMYKRLMNRD YITLFSPDVA
NDRLYDLFYE ADQTAFEELY ESLEKDPTVR KKRIKAVDLF QLLAQERAQT GRKYIFNTHH
VNQQGSFTVP VRMSNLCCEI AIPTSPLDDD DKMAGEIGLC TLMAIVLDNA DISEFPKLTR
IAVRALDNLL DYQNYPVKAA LKAKQRRSLG VGITNYASWL ASNYCDYSEA YTDKVHELME
AFQFNLLVAS MELAKERGAC GLYNDTKYAR GLLPIDWYCK TVDELVAPVY NCDWEWLRSQ
IKKYGLRNST LSALMPCESS SQVSNSTNGI EPPRGLVSIK SSKEGHYNQV VPNQNNQIDF
YDLLWDMAKR GNKGYLSHVA VMQKFVDQSI SANTNYDPAN YEDGKVKTED IIDDLLYANY
YGVKTLYYHN TRDGAGDEEE AAEDCAGCKI
//