ID K8EZ41_9CHLO Unreviewed; 1219 AA.
AC K8EZ41;
DT 06-FEB-2013, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2013, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=Carbamoyl-phosphate synthase, large subunit {ECO:0000313|EMBL:CCO14498.1};
GN ORFNames=Bathy01g05430 {ECO:0000313|EMBL:CCO14498.1};
OS Bathycoccus prasinos.
OC Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales;
OC Bathycoccaceae; Bathycoccus.
OX NCBI_TaxID=41875 {ECO:0000313|EMBL:CCO14498.1, ECO:0000313|Proteomes:UP000198341};
RN [1] {ECO:0000313|EMBL:CCO14498.1, ECO:0000313|Proteomes:UP000198341}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RCC 1105 {ECO:0000313|EMBL:CCO14498.1,
RC ECO:0000313|Proteomes:UP000198341};
RA Genoscope - CEA;
RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2 ATP + hydrogencarbonate + NH4(+) = 2 ADP + carbamoyl
CC phosphate + 2 H(+) + phosphate; Xref=Rhea:RHEA:18029,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:17544, ChEBI:CHEBI:28938,
CC ChEBI:CHEBI:30616, ChEBI:CHEBI:43474, ChEBI:CHEBI:58228,
CC ChEBI:CHEBI:456216; EC=6.3.4.16;
CC Evidence={ECO:0000256|ARBA:ARBA00043687};
CC -!- PATHWAY: Amino-acid biosynthesis; L-arginine biosynthesis; carbamoyl
CC phosphate from bicarbonate: step 1/1. {ECO:0000256|ARBA:ARBA00005077}.
CC -!- SIMILARITY: Belongs to the CarB family.
CC {ECO:0000256|ARBA:ARBA00009799}.
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DR EMBL; FO082278; CCO14498.1; -; Genomic_DNA.
DR RefSeq; XP_007515619.1; XM_007515557.1.
DR AlphaFoldDB; K8EZ41; -.
DR STRING; 41875.K8EZ41; -.
DR GeneID; 19018278; -.
DR KEGG; bpg:Bathy01g05430; -.
DR eggNOG; KOG0370; Eukaryota.
DR OrthoDB; 309at2759; -.
DR UniPathway; UPA00070; UER00115.
DR Proteomes; UP000198341; Chromosome_1.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004088; F:carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0044205; P:'de novo' UMP biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd01424; MGS_CPS_II; 1.
DR Gene3D; 3.40.50.20; -; 2.
DR Gene3D; 3.30.1490.20; ATP-grasp fold, A domain; 1.
DR Gene3D; 3.30.470.20; ATP-grasp fold, B domain; 2.
DR Gene3D; 1.10.1030.10; Carbamoyl-phosphate synthetase, large subunit oligomerisation domain; 1.
DR Gene3D; 3.40.50.1380; Methylglyoxal synthase-like domain; 1.
DR HAMAP; MF_01210_B; CPSase_L_chain_B; 1.
DR InterPro; IPR011761; ATP-grasp.
DR InterPro; IPR013815; ATP_grasp_subdomain_1.
DR InterPro; IPR006275; CarbamoylP_synth_lsu.
DR InterPro; IPR005480; CarbamoylP_synth_lsu_oligo.
DR InterPro; IPR036897; CarbamoylP_synth_lsu_oligo_sf.
DR InterPro; IPR005479; CbamoylP_synth_lsu-like_ATP-bd.
DR InterPro; IPR005483; CbamoylP_synth_lsu_CPSase_dom.
DR InterPro; IPR011607; MGS-like_dom.
DR InterPro; IPR036914; MGS-like_dom_sf.
DR InterPro; IPR033937; MGS_CPS_CarB.
DR InterPro; IPR016185; PreATP-grasp_dom_sf.
DR NCBIfam; TIGR01369; CPSaseII_lrg; 1.
DR PANTHER; PTHR11405:SF5; CAD PROTEIN; 1.
DR PANTHER; PTHR11405; CARBAMOYLTRANSFERASE FAMILY MEMBER; 1.
DR Pfam; PF02786; CPSase_L_D2; 2.
DR Pfam; PF02787; CPSase_L_D3; 1.
DR Pfam; PF02142; MGS; 1.
DR PRINTS; PR00098; CPSASE.
DR SMART; SM01096; CPSase_L_D3; 1.
DR SMART; SM00851; MGS; 1.
DR SUPFAM; SSF48108; Carbamoyl phosphate synthetase, large subunit connection domain; 1.
DR SUPFAM; SSF56059; Glutathione synthetase ATP-binding domain-like; 2.
DR SUPFAM; SSF52335; Methylglyoxal synthase-like; 1.
DR SUPFAM; SSF52440; PreATP-grasp domain; 2.
DR PROSITE; PS50975; ATP_GRASP; 2.
DR PROSITE; PS00866; CPSASE_1; 1.
DR PROSITE; PS00867; CPSASE_2; 2.
DR PROSITE; PS51855; MGS; 1.
PE 3: Inferred from homology;
KW Amino-acid biosynthesis {ECO:0000256|ARBA:ARBA00022605};
KW Arginine biosynthesis {ECO:0000256|ARBA:ARBA00022571};
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|PROSITE-
KW ProRule:PRU00409}; Ligase {ECO:0000256|ARBA:ARBA00022598};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Manganese {ECO:0000256|ARBA:ARBA00023211};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741, ECO:0000256|PROSITE-
KW ProRule:PRU00409}; Pyrimidine biosynthesis {ECO:0000256|ARBA:ARBA00022975};
KW Reference proteome {ECO:0000313|Proteomes:UP000198341};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 76..102
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 263..459
FT /note="ATP-grasp"
FT /evidence="ECO:0000259|PROSITE:PS50975"
FT DOMAIN 824..1017
FT /note="ATP-grasp"
FT /evidence="ECO:0000259|PROSITE:PS50975"
FT DOMAIN 1084..1219
FT /note="MGS-like"
FT /evidence="ECO:0000259|PROSITE:PS51855"
SQ SEQUENCE 1219 AA; 132334 MW; 2B0B2DBFC05BAE27 CRC64;
MQSQSVMSSA KPTNGTLFGS RHDVSAAALK KASTKAQQQQ SRRRLQPIDA VSAAGKEFRA
WDDAKNSKKR TDLKKIMIIG AGPIVIGQVI TLSLLSVFVF FIDPPPVRSS GRRVGDDTMM
MMSFKIVCLC FWFVFGSNFQ TTPTKIASVS RHACEFDYSG TQACKALRAE GYDVILINSN
PATIMTDPET AARTFITPMT PEYVEKIIAA EKPDAVLPTM GGQTALNLTK ALAEAGIFEK
YGVELIGAKL PAINKAEDRQ LFKDAMTKIG LKTPQSGTAE TWEQAKEIAA EIGTLPLIIR
PAFTLGGSGG GIAYNMKEFE QITKGGLDAS ATSQVLIEQS LLGWKEYELE VMRDLADNVV
IVCSIENFDP MGVHTGDSIT IAPAQTLTDK EYQRLRDASL AIIREIGVEC GGSNVQMAVN
PADGELMIIE MNPRVSRSSA LASKATGFPI AKMAAKMALG ATMDGIPNDI TMKTPAAFEP
SIDYVVTKIP RFAFEKFPGA EPILTTQMKS VGEAMAMGRT WQESFNKALR SLETGLSGWG
LNKNDGFMQN DPELIKERLV VPSPERVVAL HEAFMSGMSE DEIIRLTTMD PWFIRQLGDL
YQTECWLKSL SSMDDLSVED WTQVKRRGYS DAQICRAFPG TVEADVRQKR KSMGVVAAMK
RVDTCAAEFE SDTPYMYSSY DGSCEAKPTN GRKILILGGG PNRIGQGIEF DYCCCHAAFA
LSDAGYETIM LNSNPETVST DYDTSDRLYF EPLTVEDVLN VCEVERPEGI IVQFGGQTPL
SLATKLEAAL KANPIQAASG NGVTHILGTP PDSIDAAEDR DRWMDILKEL DIRQPAGGVC
VDEGEALSTA ERVGYPVMVR PSYVLGGRAM EVVSTPSQLK RYLSTAVEVD PERPVLVDKY
LDQATELDVD ALCDSFGNVV IGGIMEHIEQ AGVHSGDSAC SLPTQTVPES ALATIREWTP
KLARRLGVVG LLNMQYAVMP DGTPYIIEAN PRASRTVPFV SKAIGHPLAK YASLVMAGQS
LEEIGFMQEP ITKHISVKEA VLPFDKFLGC DTLLGPEMRS TGEVMGIDFD FERAYCKAQI
AAGQKLPKSG KVFISVKNSD KEAMVPVAKN LVDMGFEILS TGGTATTLES AGIKVTKVKK
IHEGRPNIGD ILRDGDLKLM FVTSSGDAND LTDGRELRRT AVGLKVPICT TVAGIKATAG
SLKILQEGNL QMQALQDFF
//