ID K9DAC6_9BURK Unreviewed; 567 AA.
AC K9DAC6;
DT 06-FEB-2013, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2013, sequence version 1.
DT 24-JAN-2024, entry version 40.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN ORFNames=HMPREF9710_04500 {ECO:0000313|EMBL:EKU80226.1};
OS Massilia timonae CCUG 45783.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Oxalobacteraceae; Telluria group; Massilia.
OX NCBI_TaxID=883126 {ECO:0000313|EMBL:EKU80226.1, ECO:0000313|Proteomes:UP000009874};
RN [1] {ECO:0000313|EMBL:EKU80226.1, ECO:0000313|Proteomes:UP000009874}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCUG 45783 {ECO:0000313|EMBL:EKU80226.1,
RC ECO:0000313|Proteomes:UP000009874};
RG The Broad Institute Genome Sequencing Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Huys G., Walker B., Young S.K.,
RA Zeng Q., Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L.,
RA Arachchi H.M., Berlin A.M., Chapman S.B., Goldberg J., Griggs A., Gujja S.,
RA Hansen M., Howarth C., Imamovic A., Larimer J., McCowen C., Montmayeur A.,
RA Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T.,
RA Sisk P., Sykes S., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Massilia timonae CCUG 45783.";
RL Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EKU80226.1}.
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DR EMBL; AGZI01000059; EKU80226.1; -; Genomic_DNA.
DR RefSeq; WP_005670258.1; NZ_JH992925.1.
DR AlphaFoldDB; K9DAC6; -.
DR STRING; 47229.LO55_4373; -.
DR PATRIC; fig|883126.3.peg.4538; -.
DR eggNOG; COG0608; Bacteria.
DR HOGENOM; CLU_009736_5_1_4; -.
DR OrthoDB; 9809852at2; -.
DR Proteomes; UP000009874; Unassembled WGS sequence.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR InterPro; IPR004610; RecJ.
DR InterPro; IPR041122; RecJ_OB.
DR NCBIfam; TIGR00644; recJ; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02272; DHHA1; 1.
DR Pfam; PF17768; RecJ_OB; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:EKU80226.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:EKU80226.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000009874}.
FT DOMAIN 77..234
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 323..449
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
FT DOMAIN 467..563
FT /note="RecJ OB"
FT /evidence="ECO:0000259|Pfam:PF17768"
SQ SEQUENCE 567 AA; 62147 MW; 09EDCA4ECB54FC85 CRC64;
MTQKTRISTR PCPFRISELL RQDGVHPVLA RIYAARGLEH VRELSSELAA LSPPSGLKHI
DAAAVFLADA IQAGKRMTIV ADYDCDGATA CAVALRGLRA MGAEVDYFVP NRVVHGYGLT
PGIVEITARE KNPDIIVTVD NGIASIEGVL EANRLGIEVV VTDHHLPGDT LPPARVIVNP
NQPECGFPSK NLAGVGVVFY VLLALRAELR RRGVFDAQTQ PKLDSLLDLV ALGTVADVVK
LDANNRILVA QGLKRMRAGR MHPGVAALFR VAGREARCAS PFDLGFAVGP RLNAAGRLED
MALGIECLTT DDEGRAWAIA QQLNEINLKR REIEAEMQDT ALLHLDTFEP TSASTIAVFD
EGWHQGVIGI VASRLKEKFY RPTITFAPAG DGWIKGSGRS IPGFHLRDAL DLVSKRVPGL
IDKFGGHSMA AGLSIRHDAF EHFCQAFEAV GQAWLTEAQL ERIVETDGPL EDEFYSTQFI
ELMDGQVWGQ GFAPPVFCDE FRVISQRVLK ERHLKLLLEK NGRRYDAIWF GHPDSLPERA
RVAFRLDANE YNGVTKVQLL VEHAEAA
//