ID K9DG80_9BURK Unreviewed; 770 AA.
AC K9DG80;
DT 06-FEB-2013, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2013, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE SubName: Full=Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKU82286.1};
GN ORFNames=HMPREF9710_02309 {ECO:0000313|EMBL:EKU82286.1};
OS Massilia timonae CCUG 45783.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Oxalobacteraceae; Telluria group; Massilia.
OX NCBI_TaxID=883126 {ECO:0000313|EMBL:EKU82286.1, ECO:0000313|Proteomes:UP000009874};
RN [1] {ECO:0000313|EMBL:EKU82286.1, ECO:0000313|Proteomes:UP000009874}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCUG 45783 {ECO:0000313|EMBL:EKU82286.1,
RC ECO:0000313|Proteomes:UP000009874};
RG The Broad Institute Genome Sequencing Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Huys G., Walker B., Young S.K.,
RA Zeng Q., Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L.,
RA Arachchi H.M., Berlin A.M., Chapman S.B., Goldberg J., Griggs A., Gujja S.,
RA Hansen M., Howarth C., Imamovic A., Larimer J., McCowen C., Montmayeur A.,
RA Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T.,
RA Sisk P., Sykes S., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Massilia timonae CCUG 45783.";
RL Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EKU82286.1}.
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DR EMBL; AGZI01000027; EKU82286.1; -; Genomic_DNA.
DR RefSeq; WP_005666547.1; NZ_JH992923.1.
DR AlphaFoldDB; K9DG80; -.
DR STRING; 47229.LO55_3027; -.
DR PATRIC; fig|883126.3.peg.2337; -.
DR eggNOG; COG5001; Bacteria.
DR HOGENOM; CLU_000445_70_49_4; -.
DR OrthoDB; 9813903at2; -.
DR Proteomes; UP000009874; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR048437; MASE11.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR44757:SF2; BIOFILM ARCHITECTURE MAINTENANCE PROTEIN MBAA; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF20969; MASE11; 1.
DR Pfam; PF13426; PAS_9; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000009874};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..36
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 42..60
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 72..97
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 103..127
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 148..170
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 230..276
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 277..331
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 363..501
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 510..762
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 770 AA; 82532 MW; 9EDA68A9FCE9C5A3 CRC64;
MLAHDDVAQW RARVFTSLMS VVLVLALIAA VPSAALAVYR NVPAVALMDT AALAWILAIW
RMDHLAYRTR VLNFLAMLYI VGVGSMLAAG AIGLFYLLAA PALAAVLLGT RPAISGLALS
AATLMVLGLT GQTDIPVGHY AHDSLPSVLI LTLNFTCVGG LITLSCGTLL KGLAGSLNDV
RTSAASLEEG QSLLRAMNGE LRLTSAALAG LNEMVLIVKV DERPGAIQPV IFANRAFERR
SGYRADEIVG RSMRMLHGPD TDPAVVARIV EAMGKREPVS AELVNYSKTG EPCWVEIEMV
PFAGEGGPIT HLVVVGRDIT ERRRSADAIE QLAFFDVLTG LPNRRLLMER LHAMVEGAHA
GRGLGAVLYI DLDNFKSVND ARGHATGDAL LKHVAAHLVD AVREGDTVAR LGGDEFVILA
ANLGSDGASA TAAAQELAQK VGKALRRPAM IDNQVYHSSG SIGVALPLRL GQTMHDLLRE
ADTAMYHAKA AGRNGVALFE TTMLAAAENV LTLERDLADA LARNELALHL QLQVDPAGAP
VGAEVLLRWR RADGVLVPPD VFIPVAEETG LIVPLGAWVL RHACLAWREL ERAGHALPLS
INVSPRQFRQ PDFVAMVRAV VQETGVPPRQ LIFEVTEGLL VDDIDDTVSR MQELAHMGIR
FSIDDFGTGY SNLAYLRKMP LYELKIDKGF IRDMPDDSNG TALVQSILAM AGQLGLRVVA
EGIETSAQAR FLAEHGQPCM QGYLFCRPMP LPDLIERLAS AEVGAADSLA
//
