ID K9YKD1_CYASC Unreviewed; 478 AA.
AC K9YKD1;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=Transposase, IS605 OrfB family {ECO:0000313|EMBL:AFZ46563.1};
GN OrderedLocusNames=Cyast_0585 {ECO:0000313|EMBL:AFZ46563.1};
OS Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202).
OC Bacteria; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae;
OC Chroococcales; Geminocystaceae; Cyanobacterium.
OX NCBI_TaxID=292563 {ECO:0000313|EMBL:AFZ46563.1, ECO:0000313|Proteomes:UP000010483};
RN [1] {ECO:0000313|Proteomes:UP000010483}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29140 / PCC 7202 {ECO:0000313|Proteomes:UP000010483};
RX PubMed=23277585; DOI=10.1073/pnas.1217107110;
RA Shih P.M., Wu D., Latifi A., Axen S.D., Fewer D.P., Talla E., Calteau A.,
RA Cai F., Tandeau de Marsac N., Rippka R., Herdman M., Sivonen K.,
RA Coursin T., Laurent T., Goodwin L., Nolan M., Davenport K.W., Han C.S.,
RA Rubin E.M., Eisen J.A., Woyke T., Gugger M., Kerfeld C.A.;
RT "Improving the coverage of the cyanobacterial phylum using diversity-driven
RT genome sequencing.";
RL Proc. Natl. Acad. Sci. U.S.A. 110:1053-1058(2013).
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC family. {ECO:0000256|ARBA:ARBA00011044}.
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DR EMBL; CP003940; AFZ46563.1; -; Genomic_DNA.
DR AlphaFoldDB; K9YKD1; -.
DR KEGG; csn:Cyast_0585; -.
DR PATRIC; fig|292563.3.peg.612; -.
DR eggNOG; COG0675; Bacteria.
DR HOGENOM; CLU_032903_0_1_3; -.
DR BioCyc; CSTA292563:G1353-592-MONOMER; -.
DR Proteomes; UP000010483; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR InterPro; IPR021027; Transposase_put_HTH.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR PANTHER; PTHR30405:SF20; RNA-GUIDED DNA ENDONUCLEASE INSQ-RELATED; 1.
DR PANTHER; PTHR30405; TRANSPOSASE; 1.
DR Pfam; PF12323; HTH_OrfB_IS605; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000010483};
KW Transposition {ECO:0000256|ARBA:ARBA00022578};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 1..43
FT /note="Transposase putative helix-turn-helix"
FT /evidence="ECO:0000259|Pfam:PF12323"
FT DOMAIN 213..318
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 350..418
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
FT REGION 251..271
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 438..458
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 251..268
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 478 AA; 55138 MW; F9A6EB19F89055DF CRC64;
MIVTHKYKLK PSESQEKKFL NWISMLRSHY NYCLRDRIEA YEEVKAPRLG EYCDLRTRAS
CTPLTCSISK NSSLGEPFKN NGKKRNAYEQ QSSELPSLKK SHPWYKTIHS TVLQQNLRRL
DKAFQNFFDG GKGYPKFKKR HQFKSFSYPP NQVKVEGDKI YLPSIGWMRM YLSCPLREGF
EMRSVTIRQK ADGFYVAIQL EDKTIPQTQP IDLVQVKSVL GVDCGARPHK LLALSNGENI
PNPQYEKRLA KRKTLRQRRA SRKKRGSNNQ RQTFKELARL DQKIVNQRED YQWKVAHKLN
RISDVIVMEK LNIQGMIRKC QPKQNEKGHF LKNGQSAKKA LNRLIRDCSW GELKDKIRQV
AEKFGRIFLE VDPKYSSQTC SHCGFKDKKN RHKESFLCLN CGTSADADTN ASITLAKRGI
KILGISLDTL LGVTQKVTGK PETTGSRNRD TSEALASEPT NPLQLSLFEW MNGRVIVR
//
